RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GRIFINA4D1Z8 144 aa18.05■□□□□ 0.48
U2AF1-204ENST00000459639 ARMS2P0C7Q2 107 aa18.05■□□□□ 0.48
U2AF1-204ENST00000459639 RIGQ13278 110 aa18.05■□□□□ 0.48
U2AF1-204ENST00000459639 MRPL18Q9H0U6 180 aaKnown RBP18.05■□□□□ 0.48
U2AF1-204ENST00000459639 A0A1B0GW15 77 aa18.04■□□□□ 0.48
U2AF1-204ENST00000459639 RAB4BP61018 213 aa18.04■□□□□ 0.48
U2AF1-204ENST00000459639 NAGKQ9UJ70 344 aa18.04■□□□□ 0.48
U2AF1-204ENST00000459639 RBMY1BA6NDE4 496 aaKnown RBP18.03■□□□□ 0.48
U2AF1-204ENST00000459639 RBMY1EA6NEQ0 496 aaKnown RBP18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BKO60814 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BJP06899 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 RBMY1DP0C7P1 496 aaKnown RBP18.03■□□□□ 0.48
U2AF1-204ENST00000459639 TRGC1P0CF51 173 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BOP23527 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BBP33778 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BDP58876 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BCP62807 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST2H2BEQ16778 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BHQ93079 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BNQ99877 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 HIST1H2BMQ99879 126 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 MCRIP2Q9BUT9 160 aaKnown RBP18.03■□□□□ 0.48
U2AF1-204ENST00000459639 ZNF324O75467 553 aaPredicted RBP18.03■□□□□ 0.48
U2AF1-204ENST00000459639 CAMPP49913 170 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 ANXA2RQ3ZCQ2 193 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 SPATA3Q8NHX4 192 aa18.03■□□□□ 0.48
U2AF1-204ENST00000459639 TRAV12-3A0A0B4J271 114 aa18.02■□□□□ 0.47
U2AF1-204ENST00000459639 F2Z2F3 143 aa18.02■□□□□ 0.47
U2AF1-204ENST00000459639 S100A8P05109 93 aa18.02■□□□□ 0.47
U2AF1-204ENST00000459639 C3orf56Q8N813 242 aa18.02■□□□□ 0.47
U2AF1-204ENST00000459639 CNFNQ9BYD5 112 aa18.02■□□□□ 0.47
U2AF1-204ENST00000459639 TRAV12-2A0A075B6T6 113 aa18.01■□□□□ 0.47
U2AF1-204ENST00000459639 SHISA2Q6UWI4 295 aa18.01■□□□□ 0.47
U2AF1-204ENST00000459639 STHQ8IWL8 128 aa18.01■□□□□ 0.47
U2AF1-204ENST00000459639 WFDC9Q8NEX5 89 aa18.01■□□□□ 0.47
U2AF1-204ENST00000459639 TMEM158Q8WZ71 300 aa18.01■□□□□ 0.47
U2AF1-204ENST00000459639 CD7P09564 240 aa18■□□□□ 0.47
U2AF1-204ENST00000459639 MUC21Q5SSG8 566 aa18■□□□□ 0.47
U2AF1-204ENST00000459639 C12orf54Q6X4T0 127 aa18■□□□□ 0.47
U2AF1-204ENST00000459639 GATD1Q8NB37 220 aa18■□□□□ 0.47
U2AF1-204ENST00000459639 KCNS1Q96KK3 526 aa18■□□□□ 0.47
U2AF1-204ENST00000459639 C19orf73Q9NVV2 129 aa18■□□□□ 0.47
U2AF1-204ENST00000459639 OR5AL1P0C617 328 aa17.99■□□□□ 0.47
U2AF1-204ENST00000459639 DNLZQ5SXM8 178 aa17.99■□□□□ 0.47
U2AF1-204ENST00000459639 FAM159AQ6UWV7 190 aa17.99■□□□□ 0.47
U2AF1-204ENST00000459639 SSBP4Q9BWG4 385 aaPredicted RBP17.99■□□□□ 0.47
U2AF1-204ENST00000459639 SNAI2O43623 268 aa17.99■□□□□ 0.47
U2AF1-204ENST00000459639 ASIPP42127 132 aa17.99■□□□□ 0.47
U2AF1-204ENST00000459639 TDRG1Q3Y452 100 aa17.99■□□□□ 0.47
U2AF1-204ENST00000459639 TRPT1Q86TN4 253 aaKnown RBP17.99■□□□□ 0.47
U2AF1-204ENST00000459639 CRXO43186 299 aaPredicted RBP17.98■□□□□ 0.47
U2AF1-204ENST00000459639 S100A6P06703 90 aa17.98■□□□□ 0.47
U2AF1-204ENST00000459639 MED14OSP0DP75 135 aa17.98■□□□□ 0.47
U2AF1-204ENST00000459639 FXYD7P58549 80 aa17.98■□□□□ 0.47
U2AF1-204ENST00000459639 APCSP02743 223 aa17.97■□□□□ 0.47
U2AF1-204ENST00000459639 AMBPP02760 352 aa17.97■□□□□ 0.47
U2AF1-204ENST00000459639 SLAQ13239 276 aa17.96■□□□□ 0.47
U2AF1-204ENST00000459639 H3BVH4 76 aa17.95■□□□□ 0.46
U2AF1-204ENST00000459639 S100A4P26447 101 aaKnown RBP17.95■□□□□ 0.46
U2AF1-204ENST00000459639 ZNF493Q6ZR52 646 aa17.95■□□□□ 0.46
U2AF1-204ENST00000459639 IGHV1OR15-1A0A075B7D0 117 aa17.94■□□□□ 0.46
U2AF1-204ENST00000459639 NTF3P20783 257 aa17.94■□□□□ 0.46
U2AF1-204ENST00000459639 CACNG7P62955 275 aa17.94■□□□□ 0.46
U2AF1-204ENST00000459639 C20orf144Q9BQM9 153 aa17.94■□□□□ 0.46
U2AF1-204ENST00000459639 MUC21A0A0G2JKD1 596 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 MUC21A0A140T8X8 626 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 WIPF1O43516 503 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 GNRH2O43555 120 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 TWIST1Q15672 202 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 IGHV4-4A0A075B6R2 117 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 RBMY1A1P0DJD3 496 aaKnown RBP17.93■□□□□ 0.46
U2AF1-204ENST00000459639 RBMY1CP0DJD4 496 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 NUTF2P61970 127 aaKnown RBP17.93■□□□□ 0.46
U2AF1-204ENST00000459639 RBMY1FQ15415 496 aaKnown RBP17.93■□□□□ 0.46
U2AF1-204ENST00000459639 GTSCR1Q86UQ5 136 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 OR10AG1Q8NH19 301 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 WFDC10AQ9H1F0 79 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 SCRT2Q9NQ03 307 aa17.93■□□□□ 0.46
U2AF1-204ENST00000459639 INSP01308 110 aa17.92■□□□□ 0.46
U2AF1-204ENST00000459639 NDUFA6P56556 154 aa17.92■□□□□ 0.46
U2AF1-204ENST00000459639 LOC105371267A0A1B0GV96 52 aa17.91■□□□□ 0.46
U2AF1-204ENST00000459639 C5orf52A6NGY3 159 aa17.91■□□□□ 0.46
U2AF1-204ENST00000459639 RNASE3P12724 160 aaKnown RBP17.91■□□□□ 0.46
U2AF1-204ENST00000459639 KIAA1644Q3SXP7 199 aa17.91■□□□□ 0.46
U2AF1-204ENST00000459639 IGLL1P15814 213 aa17.9■□□□□ 0.46
U2AF1-204ENST00000459639 SSTP61278 116 aa17.9■□□□□ 0.46
U2AF1-204ENST00000459639 SNRPEP62304 92 aaKnown RBP17.9■□□□□ 0.46
U2AF1-204ENST00000459639 FBN1P35555 2871 aaKnown RBP17.89■□□□□ 0.46
U2AF1-204ENST00000459639 SPANXN1Q5VSR9 72 aa17.89■□□□□ 0.45
U2AF1-204ENST00000459639 TMEM191AQ9H0A3 160 aa17.89■□□□□ 0.45
U2AF1-204ENST00000459639 MSRB1Q9NZV6 116 aa17.89■□□□□ 0.45
U2AF1-204ENST00000459639 TIMM8BQ9Y5J9 83 aaPredicted RBP17.89■□□□□ 0.45
U2AF1-204ENST00000459639 VWFP04275 2813 aa17.89■□□□□ 0.45
U2AF1-204ENST00000459639 TRGV11A0A075B6L2 103 aa17.88■□□□□ 0.45
U2AF1-204ENST00000459639 LOC102724200A0A096LPH7 203 aaPredicted RBP17.88■□□□□ 0.45
U2AF1-204ENST00000459639 IGHV3-16A0A0C4DH30 117 aa17.88■□□□□ 0.45
U2AF1-204ENST00000459639 Q8N1Y9 231 aa17.88■□□□□ 0.45
U2AF1-204ENST00000459639 LINC00467Q9BRT7 94 aa17.88■□□□□ 0.45
U2AF1-204ENST00000459639 PHLDA3Q9Y5J5 127 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms