RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TGIF2-C20orf24A0A0A6YYL0 155 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 SNURFLB1AK76 121 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 M0R2Z0 102 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 APCSP02743 223 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 CXCL1P09341 107 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 IGLL1P15814 213 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 CAMPP49913 170 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 SSTP61278 116 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 ZNF415Q09FC8 603 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 FABP9Q0Z7S8 132 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 BEAN1Q3B7T3 259 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 MUC21Q5SSG8 566 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 MRPL54Q6P161 138 aaKnown RBP4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 ADAMTSL5Q6ZMM2 481 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 PRIMA1Q86XR5 153 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 ZFP82Q8N141 532 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 GNB1LQ9BYB4 327 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 CSTL1Q9H114 145 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 SRD5A3Q9H8P0 318 aa4.35□□□□□ -1.71
RNU1-88P-201ENST00000459274 AGRNO00468 2067 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 FN1P02751 2386 aaKnown RBP4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 TRAV12-2A0A075B6T6 113 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 GRIFINA4D1Z8 144 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 KLLNB2CW77 178 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 UBE2CO00762 179 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 PPP1R17O96001 155 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 MED14OSP0DP75 135 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 PRB4P10163 310 aaPredicted RBP4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 RPL35AP18077 110 aaKnown RBP4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 FOXA3P55318 350 aaPredicted RBP4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 FXYD7P58549 80 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 RRN3P1Q2M238 152 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 ANXA2RQ3ZCQ2 193 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 LYZL1Q6UWQ5 148 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 NUP35Q8NFH5 326 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 SPXQ9BT56 116 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 XCL2Q9UBD3 114 aa4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 TMA7Q9Y2S6 64 aaKnown RBP4.34□□□□□ -1.71
RNU1-88P-201ENST00000459274 MTORP42345 2549 aa4.34□□□□□ -1.72
RNU1-88P-201ENST00000459274 KIR2DL5BA0A0G2JN68 375 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 KIR2DL5BA0A0G2JPC4 375 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 SMIM9A6NGZ8 99 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 COLCA2A8K830 154 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 CYSRT1A8MQ03 144 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 F5H697 171 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 M0R381 172 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 PPBPP02775 128 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 TYMSP04818 313 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 OR5AL1P0C617 328 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 NTF3P20783 257 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 S100A2P29034 98 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 GDF5OSQ5U4N7 250 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZNF493Q6ZR52 646 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 TRPT1Q86TN4 253 aaKnown RBP4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 KIR2DL5AQ8N109 375 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZFAND2AQ8N6M9 145 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 KIR2DL5BQ8NHK3 375 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 AP1S3Q96PC3 154 aa4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 MRPL18Q9H0U6 180 aaKnown RBP4.33□□□□□ -1.72
RNU1-88P-201ENST00000459274 FLNBO75369 2602 aaKnown RBP4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 H3BVH4 76 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 H7C1H1 209 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 TRGC2P03986 189 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 ARMS2P0C7Q2 107 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 GZMBP10144 247 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 G0S2P27469 103 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 CKS2P33552 79 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 CRIP1P50238 77 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZNF80P51504 273 aaPredicted RBP4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 TDRG1Q3Y452 100 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 DEFB121Q5J5C9 76 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 LINC00322Q6ZN03 302 aaPredicted RBP4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 BAGE3Q86Y29 109 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 FAM19A4Q96LR4 140 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 RCHY1Q96PM5 261 aa4.32□□□□□ -1.72
RNU1-88P-201ENST00000459274 C2CD3Q4AC94 2353 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZANQ9Y493 2812 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 A8MWV9 139 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 M0R2P5 195 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 GNRH2O43555 120 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 CIDEAO60543 219 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 MGPP08493 103 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 NDUFA6P56556 154 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 DEFB1P60022 68 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 ZNF876PQ49A33 203 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 OXLD1Q5BKU9 147 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 DNLZQ5SXM8 178 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 Q8N1Y9 231 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 PRSS3P2Q8NHM4 247 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 TMEM263Q8WUH6 116 aaKnown RBP4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 NDUFAF3Q9BU61 184 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 DPH3P1Q9H4G8 78 aa4.31□□□□□ -1.72
RNU1-88P-201ENST00000459274 TRGV2A0A075B6R0 118 aa4.3□□□□□ -1.72
RNU1-88P-201ENST00000459274 IGKV3D-20A0A0C4DH25 116 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms