RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 GATA1P15976 413 aaPredicted RBP8.31□□□□□ -1.08
RFX3-211ENST00000458034 SLC25A16P16260 332 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 RPL11P62913 178 aaKnown RBP8.31□□□□□ -1.08
RFX3-211ENST00000458034 UNQ9165/PRO28630Q6UXU0 137 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 Q6ZVH6 145 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 APRG1Q8IVJ8 170 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 ZFAND2AQ8N6M9 145 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 C20orf78Q9BR46 151 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 DKK2Q9UBU2 259 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 PHLDA3Q9Y5J5 127 aa8.31□□□□□ -1.08
RFX3-211ENST00000458034 ATMQ13315 3056 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 IGHV4-30-2A0A087WSY4 118 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 IGLV1-40P01703 118 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 TRBV12-3P01733 135 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 IGHV3-11P01762 117 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 PRR9Q5T870 116 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 GPHB5Q86YW7 130 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 FAM19A4Q96LR4 140 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 RHPN1-AS1Q9BWJ2 59 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 DAZ1Q9NQZ3 744 aaKnown RBP8.3□□□□□ -1.08
RFX3-211ENST00000458034 CEP295Q9C0D2 2601 aa8.3□□□□□ -1.08
RFX3-211ENST00000458034 A0A087WX48 190 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 TRAV12-1A0A0B4J245 112 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 C9orf118A6NHY6 69 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.29□□□□□ -1.08
RFX3-211ENST00000458034 GAS8-AS1O95177 125 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 PLNP26678 52 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 ANXA2RQ3ZCQ2 193 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 TM4SF20Q53R12 229 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 SPOCK3Q9BQ16 436 aa8.29□□□□□ -1.08
RFX3-211ENST00000458034 SPTBN1Q01082 2364 aaKnown RBP8.29□□□□□ -1.08
RFX3-211ENST00000458034 IGF2RP11717 2491 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 J3KRW8 73 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 J3QLI3 93 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 RNASE4P34096 147 aaKnown RBP8.28□□□□□ -1.08
RFX3-211ENST00000458034 CFHR3Q02985 330 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 AMMECR1LQ6DCA0 310 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 ABCA2Q9BZC7 2435 aa8.28□□□□□ -1.08
RFX3-211ENST00000458034 TRAV26-2A0A0B4J265 109 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 H7C1H1 209 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 MGPP08493 103 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 SUMO2P61956 95 aaKnown RBP8.27□□□□□ -1.09
RFX3-211ENST00000458034 PCP2Q8IVA1 136 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 ODF3Q96PU9 254 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 KLK15Q9H2R5 256 aa8.27□□□□□ -1.09
RFX3-211ENST00000458034 GAGE10A6NGK3 116 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 NXPH4O95158 308 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
RFX3-211ENST00000458034 BLCAPP62952 87 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 TAL2Q16559 108 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 FAM159AQ6UWV7 190 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 LINC01356Q8N9X3 169 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 TMEM160Q9NX00 188 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 HHLA3Q9XRX5 114 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 HRNRQ86YZ3 2850 aaPredicted RBP8.26□□□□□ -1.09
RFX3-211ENST00000458034 NBASA2RRP1 2371 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 ADGRG4Q8IZF6 3080 aa8.26□□□□□ -1.09
RFX3-211ENST00000458034 TRAV8-6A0A0B4J262 113 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 F8VRH5 84 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 ZZEF1O43149 2961 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 SMIM13P0DJ93 91 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 TCTAP57738 103 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 GTSCR1Q86UQ5 136 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 POM121L12Q8N7R1 296 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 RASL10AQ92737 203 aa8.25□□□□□ -1.09
RFX3-211ENST00000458034 MRPL35Q9NZE8 188 aaKnown RBP8.25□□□□□ -1.09
RFX3-211ENST00000458034 CHTOPQ9Y3Y2 248 aaKnown RBP8.25□□□□□ -1.09
RFX3-211ENST00000458034 DMXL2Q8TDJ6 3036 aa8.24□□□□□ -1.09
RFX3-211ENST00000458034 MED13LQ71F56 2210 aa8.24□□□□□ -1.09
RFX3-211ENST00000458034 KLLNB2CW77 178 aa8.24□□□□□ -1.09
RFX3-211ENST00000458034 Q6ZQT7 251 aa8.24□□□□□ -1.09
RFX3-211ENST00000458034 ERASQ7Z444 233 aa8.24□□□□□ -1.09
RFX3-211ENST00000458034 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
RFX3-211ENST00000458034 OR5A1Q8NGJ0 315 aa8.24□□□□□ -1.09
RFX3-211ENST00000458034 SMG1Q96Q15 3661 aaKnown RBP8.24□□□□□ -1.09
RFX3-211ENST00000458034 ATRXP46100 2492 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 IGKV3-7A0A075B6H7 116 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 F6UB75 175 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 LINC01619G3V211 115 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 K7EP34 96 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 DUSP14O95147 198 aaKnown RBP8.23□□□□□ -1.09
RFX3-211ENST00000458034 RNASE3P12724 160 aaKnown RBP8.23□□□□□ -1.09
RFX3-211ENST00000458034 GCSHP23434 173 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 PSMB8P28062 276 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
RFX3-211ENST00000458034 LINC00528Q8N1L1 170 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 SYT8Q8NBV8 401 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 LAMA5O15230 3695 aa8.23□□□□□ -1.09
RFX3-211ENST00000458034 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
RFX3-211ENST00000458034 IGKV2D-26A0A0A0MRZ7 120 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms