RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 SELENOKQ9Y6D0 94 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 SORL1Q92673 2214 aa6.61□□□□□ -1.35
CDC42EP3-204ENST00000457889 CA1P00915 261 aaPredicted RBP6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 ORM1P02763 201 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 TDRG1Q3Y452 100 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 DNLZQ5SXM8 178 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 GDF5OSQ5U4N7 250 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 STHQ8IWL8 128 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 NUP35Q8NFH5 326 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 GNB1LQ9BYB4 327 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 NOTCH3Q9UM47 2321 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 COL6A5A8TX70 2615 aa6.6□□□□□ -1.35
CDC42EP3-204ENST00000457889 A0A1B0GUT8 65 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 KNCNA6PVL3 124 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 C1orf196B1AJZ1 125 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 HLA-DQA1P01909 254 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 IGLC6P0CF74 106 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 RNASE4P34096 147 aaKnown RBP6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 RPS10P46783 165 aaKnown RBP6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 TCL1AP56279 114 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 DEFB1P60022 68 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 RAB5BP61020 215 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 HBBP68871 147 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 RIGQ13278 110 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 PRR31Q5SQ13 230 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 MORN3Q6PF18 240 aaPredicted RBP6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 TRPT1Q86TN4 253 aaKnown RBP6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 TMEM256Q8N2U0 113 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 FER1L6-AS1Q8NA97 138 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 GTSF1Q8WW33 167 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 LINC00467Q9BRT7 94 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 C1QTNF4Q9BXJ3 329 aa6.59□□□□□ -1.35
CDC42EP3-204ENST00000457889 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 A0A1B0GXF2 115 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 INSP01308 110 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 OR5AL1P0C617 328 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 ASIPP42127 132 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 PRR9Q5T870 116 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 GFI1BQ5VTD9 330 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 FAM159AQ6UWV7 190 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 C19orf73Q9NVV2 129 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 VWFP04275 2813 aa6.58□□□□□ -1.36
CDC42EP3-204ENST00000457889 TRGV11A0A075B6L2 103 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 SNAI2O43623 268 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 ZNF324O75467 553 aaPredicted RBP6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 PRB4P10163 310 aaPredicted RBP6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 CACNG7P62955 275 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 SPINK13Q1W4C9 94 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 GATD1Q8NB37 220 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 PGLYRP4Q96LB8 373 aa6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 FBN1P35555 2871 aaKnown RBP6.57□□□□□ -1.36
CDC42EP3-204ENST00000457889 IGHV4-4A0A075B6R2 117 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 M0R2Z0 102 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 IGKV3-20P01619 116 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 CD7P09564 240 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 S100A4P26447 101 aaKnown RBP6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 ANXA2RQ3ZCQ2 193 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 MRPL54Q6P161 138 aaKnown RBP6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 LYZL1Q6UWQ5 148 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 NAGKQ9UJ70 344 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 TP53TG3Q9ULZ0 132 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 TRAPPC1Q9Y5R8 145 aa6.56□□□□□ -1.36
CDC42EP3-204ENST00000457889 TMSB15BA0A087X1C1 80 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 TRAV12-3A0A0B4J271 114 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 RBMY1BA6NDE4 496 aaKnown RBP6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 RBMY1EA6NEQ0 496 aaKnown RBP6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 SNURFLB1AK76 121 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 J3KRW8 73 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 CRXO43186 299 aaPredicted RBP6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 TRGC2P03986 189 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 RBMY1DP0C7P1 496 aaKnown RBP6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 GZMBP10144 247 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 PIK3CD-AS1Q5SR53 167 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 TMEM136Q6ZRR5 245 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 SCRT2Q9NQ03 307 aa6.55□□□□□ -1.36
CDC42EP3-204ENST00000457889 AGRNO00468 2067 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 TRAV12-2A0A075B6T6 113 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 KIR2DL5BA0A0G2JN68 375 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 KIR2DL5BA0A0G2JPC4 375 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 PHOX2AO14813 284 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 PAX4O43316 350 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 NXPH4O95158 308 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 ARMS2P0C7Q2 107 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 IGLL1P15814 213 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 RAB4BP61018 213 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 EGFEM1PQ0D2K5 195 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 SMIM15Q7Z3B0 74 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 ZNF575Q86XF7 245 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 KIR2DL5AQ8N109 375 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 FRZBQ92765 325 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 MRPL18Q9H0U6 180 aaKnown RBP6.54□□□□□ -1.36
CDC42EP3-204ENST00000457889 GOLT1BQ9Y3E0 138 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms