RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ESRGQ1W209 222 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
CPSF6-203ENST00000456847 IGHV3-16A0A0C4DH30 117 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 FBLL1A6NHQ2 334 aaKnown RBP11.24□□□□□ -0.61
CPSF6-203ENST00000456847 GCGP01275 180 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 PPT1P50897 306 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 ZNF345Q14585 488 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 SMUG1Q53HV7 270 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 KCNRGQ8N5I3 272 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 Q9H8V8 135 aa11.24□□□□□ -0.61
CPSF6-203ENST00000456847 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
CPSF6-203ENST00000456847 SFTA3P0C7M3 94 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 HHLA3Q9XRX5 114 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 M0R2P5 195 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 IGLV2-11P01706 119 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
CPSF6-203ENST00000456847 CRYBA4P53673 196 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 FHL2Q14192 279 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 STOML3Q8TAV4 291 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 RASL10AQ92737 203 aa11.23□□□□□ -0.61
CPSF6-203ENST00000456847 TRAV34A0A0B4J273 112 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 A0A1B0GVY2 172 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 KANTRA0A1W2PQU2 76 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 PEX7O00628 323 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 TTC32Q5I0X7 151 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 SAPCD1Q5SSQ6 148 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 C6orf223Q8N319 242 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 ZNF479Q96JC4 524 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 UPK3BQ9BT76 320 aa11.22□□□□□ -0.61
CPSF6-203ENST00000456847 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
CPSF6-203ENST00000456847 FAM74A7A6NL05 159 aa11.21□□□□□ -0.61
CPSF6-203ENST00000456847 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
CPSF6-203ENST00000456847 OR4C5Q8NGB2 326 aa11.21□□□□□ -0.61
CPSF6-203ENST00000456847 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.61
CPSF6-203ENST00000456847 NKX6-2Q9C056 277 aaPredicted RBP11.21□□□□□ -0.61
CPSF6-203ENST00000456847 TRAV4A0A0B4J268 109 aa11.21□□□□□ -0.62
CPSF6-203ENST00000456847 A0A0D9SG52 128 aa11.21□□□□□ -0.62
CPSF6-203ENST00000456847 HMSDA8MTL9 139 aa11.21□□□□□ -0.62
CPSF6-203ENST00000456847 OR11H4Q8NGC9 324 aa11.21□□□□□ -0.62
CPSF6-203ENST00000456847 LINC00479Q96M42 142 aa11.21□□□□□ -0.62
CPSF6-203ENST00000456847 ARL2-SNX15V9GYD0 113 aa11.21□□□□□ -0.62
CPSF6-203ENST00000456847 DNAH2Q9P225 4427 aa11.2□□□□□ -0.62
CPSF6-203ENST00000456847 BCL2L11O43521 198 aa11.2□□□□□ -0.62
CPSF6-203ENST00000456847 MRPL23Q16540 153 aaKnown RBP11.2□□□□□ -0.62
CPSF6-203ENST00000456847 HECTD4Q9Y4D8 3996 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 C9JCJ5 164 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 Q86TA4 180 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 HIST1H2BAQ96A08 127 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 C11orf21Q9P2W6 132 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 PFDN1O60925 122 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 FHITP49789 147 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 CST9LP1Q5W188 147 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 FAM213BQ8TBF2 198 aa11.19□□□□□ -0.62
CPSF6-203ENST00000456847 DNAH17Q9UFH2 4485 aa11.18□□□□□ -0.62
CPSF6-203ENST00000456847 SEC11BP0C7V7 166 aa11.18□□□□□ -0.62
CPSF6-203ENST00000456847 SRIP30626 198 aa11.18□□□□□ -0.62
CPSF6-203ENST00000456847 UBE2G1P62253 170 aa11.18□□□□□ -0.62
CPSF6-203ENST00000456847 EIF5AP63241 154 aaKnown RBP11.18□□□□□ -0.62
CPSF6-203ENST00000456847 GYPEP15421 78 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 NEGR1Q7Z3B1 354 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 FAT2Q9NYQ8 4349 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 A0A1B0GV50 99 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 UMAD1C9J7I0 102 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 NXPH4O95158 308 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 ORM1P02763 201 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 ZNF876PQ49A33 203 aa11.17□□□□□ -0.62
CPSF6-203ENST00000456847 K7EQD1 137 aa11.16□□□□□ -0.62
CPSF6-203ENST00000456847 SIVA1O15304 175 aa11.16□□□□□ -0.62
CPSF6-203ENST00000456847 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
CPSF6-203ENST00000456847 SFT2D1Q8WV19 159 aa11.16□□□□□ -0.62
CPSF6-203ENST00000456847 A0A1W2PPQ1 181 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 AKR1C3P42330 323 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 TNP2Q05952 138 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 TMUB2Q71RG4 321 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 FMC1Q96HJ9 113 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 KRTAP1-5Q9BYS1 174 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 TPT1P13693 172 aaKnown RBP11.15□□□□□ -0.62
CPSF6-203ENST00000456847 LYPD5Q6UWN5 251 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 TXNDC17Q9BRA2 123 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
CPSF6-203ENST00000456847 PAGE4O60829 102 aa11.14□□□□□ -0.63
CPSF6-203ENST00000456847 ASIPP42127 132 aa11.14□□□□□ -0.63
CPSF6-203ENST00000456847 DPPA3Q6W0C5 159 aa11.14□□□□□ -0.63
CPSF6-203ENST00000456847 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
CPSF6-203ENST00000456847 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 NHLRC2Q8NBF2 726 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 MBD3L1Q8WWY6 194 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 ZC2HC1AQ96GY0 325 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 LOC100131303A0A0U1RQF7 123 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 PGPEP1LA6NFU8 196 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 B4DEV8 164 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 RS1O15537 224 aa11.13□□□□□ -0.63
CPSF6-203ENST00000456847 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
CPSF6-203ENST00000456847 GATA1P15976 413 aaPredicted RBP11.13□□□□□ -0.63
CPSF6-203ENST00000456847 IGHV3-73A0A0B4J1V6 119 aa11.12□□□□□ -0.63
CPSF6-203ENST00000456847 M0R036 132 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms