RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 PPT1P50897 306 aa11.2□□□□□ -0.62
TVP23A-202ENST00000456096 KHDC3LQ587J8 217 aa11.2□□□□□ -0.62
TVP23A-202ENST00000456096 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
TVP23A-202ENST00000456096 MZT2BQ6NZ67 158 aa11.2□□□□□ -0.62
TVP23A-202ENST00000456096 Q6ZSN1 163 aa11.2□□□□□ -0.62
TVP23A-202ENST00000456096 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
TVP23A-202ENST00000456096 PGPA6NDG6 321 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 IBA57-AS1B1ANH7 110 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 TYMSP04818 313 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 Q8N814 137 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 TVP23CQ96ET8 276 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 ATP5SQ99766 215 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 Q9HAA7 133 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 OTORQ9NRC9 128 aa11.19□□□□□ -0.62
TVP23A-202ENST00000456096 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 F6UZH7 168 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 TAS2R45P59539 299 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 SLC25A29Q8N8R3 303 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 FAM30AQ9NZY2 134 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 MBD2Q9UBB5 411 aa11.18□□□□□ -0.62
TVP23A-202ENST00000456096 TRAV8-1A0A0A6YYK1 113 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 TRAV8-6A0A0B4J262 113 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 FBLL1A6NHQ2 334 aaKnown RBP11.17□□□□□ -0.62
TVP23A-202ENST00000456096 PFN1P07737 140 aaKnown RBP11.17□□□□□ -0.62
TVP23A-202ENST00000456096 ASAH1Q13510 395 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 SDF2L1Q9HCN8 221 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 TREM1Q9NP99 234 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
TVP23A-202ENST00000456096 IGHV3-30P01768 117 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 IGHV3-33P01772 117 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 IGHV3-30-3P0DP02 117 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 IGHV3-30-5P0DP03 117 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 CYCSP99999 105 aaKnown RBP11.16□□□□□ -0.62
TVP23A-202ENST00000456096 FAM74A1Q5RGS3 127 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 SCGB1C1Q8TD33 95 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 ASB13Q8WXK3 278 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 SMIM3Q9BZL3 60 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 HSPB11Q9Y547 144 aa11.16□□□□□ -0.62
TVP23A-202ENST00000456096 H2BFSP57053 126 aa11.15□□□□□ -0.62
TVP23A-202ENST00000456096 ZNF876PQ49A33 203 aa11.15□□□□□ -0.62
TVP23A-202ENST00000456096 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
TVP23A-202ENST00000456096 DPPA3Q6W0C5 159 aa11.15□□□□□ -0.62
TVP23A-202ENST00000456096 ENKURQ8TC29 256 aa11.15□□□□□ -0.62
TVP23A-202ENST00000456096 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
TVP23A-202ENST00000456096 IGHV3-73A0A0B4J1V6 119 aa11.14□□□□□ -0.63
TVP23A-202ENST00000456096 GNG5P63218 68 aa11.14□□□□□ -0.63
TVP23A-202ENST00000456096 ARL6IP6Q8N6S5 226 aa11.14□□□□□ -0.63
TVP23A-202ENST00000456096 SGK494Q96LW2 274 aa11.14□□□□□ -0.63
TVP23A-202ENST00000456096 PRADC1Q9BSG0 188 aa11.14□□□□□ -0.63
TVP23A-202ENST00000456096 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
TVP23A-202ENST00000456096 TRBV6-4A0A1B0GX49 114 aa11.13□□□□□ -0.63
TVP23A-202ENST00000456096 J3QL48 77 aa11.13□□□□□ -0.63
TVP23A-202ENST00000456096 RS1O15537 224 aa11.13□□□□□ -0.63
TVP23A-202ENST00000456096 RHOHQ15669 191 aa11.13□□□□□ -0.63
TVP23A-202ENST00000456096 LELP1Q5T871 98 aa11.13□□□□□ -0.63
TVP23A-202ENST00000456096 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
TVP23A-202ENST00000456096 A0A1W2PPV4 95 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 A6NHS1 94 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 HMGB3O15347 200 aaKnown RBP11.12□□□□□ -0.63
TVP23A-202ENST00000456096 MPC2O95563 127 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 C1QBP02746 253 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 RPL12P30050 165 aaKnown RBP11.12□□□□□ -0.63
TVP23A-202ENST00000456096 ZNF80P51504 273 aaPredicted RBP11.12□□□□□ -0.63
TVP23A-202ENST00000456096 PQLC2Q6ZP29 291 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 WFDC1Q9HC57 220 aa11.12□□□□□ -0.63
TVP23A-202ENST00000456096 CIDEAO60543 219 aa11.11□□□□□ -0.63
TVP23A-202ENST00000456096 RAB2AP61019 212 aa11.11□□□□□ -0.63
TVP23A-202ENST00000456096 WFDC2Q14508 124 aa11.11□□□□□ -0.63
TVP23A-202ENST00000456096 ACOT6Q3I5F7 207 aaPredicted RBP11.11□□□□□ -0.63
TVP23A-202ENST00000456096 LINC00299Q6ZSB3 139 aa11.11□□□□□ -0.63
TVP23A-202ENST00000456096 Q8N3U1 123 aa11.11□□□□□ -0.63
TVP23A-202ENST00000456096 PGPEP1LA6NFU8 196 aa11.1□□□□□ -0.63
TVP23A-202ENST00000456096 INMT-MINDY4F8WBC2 141 aa11.1□□□□□ -0.63
TVP23A-202ENST00000456096 LAGE3Q14657 143 aa11.1□□□□□ -0.63
TVP23A-202ENST00000456096 ATP6V0E2Q8NHE4 81 aa11.1□□□□□ -0.63
TVP23A-202ENST00000456096 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
TVP23A-202ENST00000456096 TM2D2Q9BX73 214 aa11.1□□□□□ -0.63
TVP23A-202ENST00000456096 TAAR5O14804 337 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 ZNF506Q5JVG8 444 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 OR10G9Q8NGN4 311 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 OR10G7Q8NGN6 311 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 S100ZQ8WXG8 99 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 NDFIP1Q9BT67 221 aa11.09□□□□□ -0.63
TVP23A-202ENST00000456096 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
TVP23A-202ENST00000456096 UPK1BO75841 260 aa11.08□□□□□ -0.64
TVP23A-202ENST00000456096 GCGP01275 180 aa11.08□□□□□ -0.64
TVP23A-202ENST00000456096 PET100P0DJ07 73 aa11.08□□□□□ -0.64
TVP23A-202ENST00000456096 MGST1P10620 155 aaKnown RBP11.08□□□□□ -0.64
TVP23A-202ENST00000456096 IFITM3Q01628 133 aa11.08□□□□□ -0.64
TVP23A-202ENST00000456096 Q6ZSA8 131 aa11.08□□□□□ -0.64
TVP23A-202ENST00000456096 LECT2O14960 151 aa11.07□□□□□ -0.64
TVP23A-202ENST00000456096 SSNA1O43805 119 aa11.07□□□□□ -0.64
TVP23A-202ENST00000456096 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
TVP23A-202ENST00000456096 TCRAP04437 139 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms