RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 FAM159AQ6UWV7 190 aa12.65□□□□□ -0.38
COL20A1-204ENST00000455906 PCNPQ8WW12 178 aaKnown RBP12.65□□□□□ -0.38
COL20A1-204ENST00000455906 ATP5SQ99766 215 aa12.65□□□□□ -0.38
COL20A1-204ENST00000455906 HSPB11Q9Y547 144 aa12.65□□□□□ -0.38
COL20A1-204ENST00000455906 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
COL20A1-204ENST00000455906 ARPC5O15511 151 aa12.64□□□□□ -0.39
COL20A1-204ENST00000455906 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
COL20A1-204ENST00000455906 EVI2AP22794 236 aa12.64□□□□□ -0.39
COL20A1-204ENST00000455906 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
COL20A1-204ENST00000455906 TMED6Q8WW62 240 aa12.64□□□□□ -0.39
COL20A1-204ENST00000455906 TRAV4A0A0B4J268 109 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 G3V3Q6 166 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL20A1-204ENST00000455906 KHDC3LQ587J8 217 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 Q5VSD8 79 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 AQP10Q96PS8 301 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 TNFSF18Q9UNG2 199 aa12.63□□□□□ -0.39
COL20A1-204ENST00000455906 IGHV3-16A0A0C4DH30 117 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 LOC100131303A0A0U1RQF7 123 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 C9JCJ5 164 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 GNRH2O43555 120 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 IFNA5P01569 189 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 C1QBP02746 253 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 HYLS1Q96M11 299 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 TXNDC17Q9BRA2 123 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 NAGKQ9UJ70 344 aa12.62□□□□□ -0.39
COL20A1-204ENST00000455906 FLG2Q5D862 2391 aaPredicted RBP12.62□□□□□ -0.39
COL20A1-204ENST00000455906 HMSDA8MTL9 139 aa12.61□□□□□ -0.39
COL20A1-204ENST00000455906 CRYGDP07320 174 aa12.61□□□□□ -0.39
COL20A1-204ENST00000455906 TAS2R45P59539 299 aa12.61□□□□□ -0.39
COL20A1-204ENST00000455906 OR4C5Q8NGB2 326 aa12.61□□□□□ -0.39
COL20A1-204ENST00000455906 OR11H4Q8NGC9 324 aa12.61□□□□□ -0.39
COL20A1-204ENST00000455906 OTORQ9NRC9 128 aa12.61□□□□□ -0.39
COL20A1-204ENST00000455906 M0R2P5 195 aa12.6□□□□□ -0.39
COL20A1-204ENST00000455906 TVP23CQ96ET8 276 aa12.6□□□□□ -0.39
COL20A1-204ENST00000455906 PGPA6NDG6 321 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 TYMSP04818 313 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 GATA1P15976 413 aaPredicted RBP12.59□□□□□ -0.39
COL20A1-204ENST00000455906 GCSHP23434 173 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 TIRAPP58753 221 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 C10orf126Q8N4M7 172 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 FRZBQ92765 325 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 RPH3ALQ9UNE2 315 aa12.59□□□□□ -0.39
COL20A1-204ENST00000455906 TRAV8-1A0A0A6YYK1 113 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 TRAV21A0A0B4J279 112 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 A0A0D9SG52 128 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 RNF222A6NCQ9 220 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 F6UZH7 168 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 GOLT1AQ6ZVE7 132 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 CMTM2Q8TAZ6 248 aa12.58□□□□□ -0.4
COL20A1-204ENST00000455906 LRCOL1A6NCL2 159 aa12.57□□□□□ -0.4
COL20A1-204ENST00000455906 SMR3BP02814 79 aaPredicted RBP12.57□□□□□ -0.4
COL20A1-204ENST00000455906 ZNF345Q14585 488 aa12.57□□□□□ -0.4
COL20A1-204ENST00000455906 SH2D6Q7Z4S9 175 aa12.57□□□□□ -0.4
COL20A1-204ENST00000455906 ARL6IP6Q8N6S5 226 aa12.57□□□□□ -0.4
COL20A1-204ENST00000455906 WFDC1Q9HC57 220 aa12.57□□□□□ -0.4
COL20A1-204ENST00000455906 BORCS7-ASMTA0A0B4J1R7 106 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 IGHV3-38A0A0C4DH36 116 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 KANTRA0A1W2PQU2 76 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 TAAR5O14804 337 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 LINC01556Q5JQF7 62 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 FAM74A1Q5RGS3 127 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 PQLC2Q6ZP29 291 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 KCNRGQ8N5I3 272 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 SDF2L1Q9HCN8 221 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 TREM1Q9NP99 234 aa12.56□□□□□ -0.4
COL20A1-204ENST00000455906 GNG5P63218 68 aa12.55□□□□□ -0.4
COL20A1-204ENST00000455906 HAMPP81172 84 aa12.55□□□□□ -0.4
COL20A1-204ENST00000455906 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
COL20A1-204ENST00000455906 PPT1P50897 306 aa12.54□□□□□ -0.4
COL20A1-204ENST00000455906 RAB2AP61019 212 aa12.54□□□□□ -0.4
COL20A1-204ENST00000455906 ACOT6Q3I5F7 207 aaPredicted RBP12.54□□□□□ -0.4
COL20A1-204ENST00000455906 TMUB2Q71RG4 321 aa12.54□□□□□ -0.4
COL20A1-204ENST00000455906 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
COL20A1-204ENST00000455906 KCNS1Q96KK3 526 aa12.54□□□□□ -0.4
COL20A1-204ENST00000455906 IGLV5-52A0A0A0MRZ9 124 aa12.53□□□□□ -0.4
COL20A1-204ENST00000455906 FBLL1A6NHQ2 334 aaKnown RBP12.53□□□□□ -0.4
COL20A1-204ENST00000455906 DPPA3Q6W0C5 159 aa12.53□□□□□ -0.4
COL20A1-204ENST00000455906 SGK494Q96LW2 274 aa12.53□□□□□ -0.4
COL20A1-204ENST00000455906 C11orf21Q9P2W6 132 aa12.53□□□□□ -0.4
COL20A1-204ENST00000455906 A0A1W2PPV4 95 aa12.52□□□□□ -0.41
COL20A1-204ENST00000455906 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.41
COL20A1-204ENST00000455906 BCL2L11O43521 198 aa12.52□□□□□ -0.41
COL20A1-204ENST00000455906 PSCAO43653 123 aa12.52□□□□□ -0.41
COL20A1-204ENST00000455906 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
COL20A1-204ENST00000455906 LGALSLQ3ZCW2 172 aaPredicted RBP12.52□□□□□ -0.41
COL20A1-204ENST00000455906 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
COL20A1-204ENST00000455906 CFAP126Q5VTH2 177 aa12.52□□□□□ -0.41
COL20A1-204ENST00000455906 RPL7L1Q6DKI1 246 aaKnown RBP12.52□□□□□ -0.41
COL20A1-204ENST00000455906 NTN5Q8WTR8 489 aaPredicted RBP12.52□□□□□ -0.41
COL20A1-204ENST00000455906 RS1O15537 224 aa12.51□□□□□ -0.41
COL20A1-204ENST00000455906 PFN1P07737 140 aaKnown RBP12.51□□□□□ -0.41
COL20A1-204ENST00000455906 NKX2-5P52952 324 aaPredicted RBP12.51□□□□□ -0.41
COL20A1-204ENST00000455906 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
COL20A1-204ENST00000455906 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
COL20A1-204ENST00000455906 ZNF471Q9BX82 626 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms