RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 TCTEX1D4Q5JR98 221 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 DNLZQ5SXM8 178 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 NBPF19A0A087WUL8 3843 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 IGHV1-24A0A0C4DH33 117 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 CTRLP40313 264 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 EBLN2Q6P2I7 272 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 TEX29Q8N6K0 151 aa10.32□□□□□ -0.76
CLK3-203ENST00000454830 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 PHLDA3Q9Y5J5 127 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 HTN1P15515 57 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 BTF3P20290 206 aaKnown RBP10.31□□□□□ -0.76
CLK3-203ENST00000454830 COX8CQ7Z4L0 72 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 DYNLRB2Q8TF09 96 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 URB1-AS1Q96HZ7 61 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 TRAV12-3A0A0B4J271 114 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 SOCS3O14543 225 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 ANXA2RQ3ZCQ2 193 aa10.31□□□□□ -0.76
CLK3-203ENST00000454830 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
CLK3-203ENST00000454830 PMCHL2Q9BQD1 86 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 OR5AL1P0C617 328 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 ASIPP42127 132 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 C2orf70A6NJV1 201 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 NPYP01303 97 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 GATA1P15976 413 aaPredicted RBP10.3□□□□□ -0.76
CLK3-203ENST00000454830 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 TMEM70Q9BUB7 260 aa10.3□□□□□ -0.76
CLK3-203ENST00000454830 GNRH2O43555 120 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 MGPP08493 103 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 FAM159AQ6UWV7 190 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 ZNF580Q9UK33 172 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
CLK3-203ENST00000454830 RAB4AP20338 218 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 SPATA45Q537H7 98 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 Q6ZSV7 163 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 OR1N2Q8NGR9 330 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 TRAV26-2A0A0B4J265 109 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 LINC01619G3V211 115 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 ZNF493Q6ZR52 646 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 TMEM191AQ9H0A3 160 aa10.29□□□□□ -0.76
CLK3-203ENST00000454830 DCANP1Q8TF63 244 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 MAP1LC3CQ9BXW4 147 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 SIGLEC8Q9NYZ4 499 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 C20orf202A1L168 122 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 BATFQ16520 125 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 LENEPQ9Y5L5 61 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 KMT2BQ9UMN6 2715 aaPredicted RBP10.28□□□□□ -0.76
CLK3-203ENST00000454830 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 SMR3AQ99954 134 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
CLK3-203ENST00000454830 GAS8-AS1O95177 125 aa10.27□□□□□ -0.76
CLK3-203ENST00000454830 CD7P09564 240 aa10.27□□□□□ -0.76
CLK3-203ENST00000454830 MAJINQ3KP22 176 aa10.27□□□□□ -0.77
CLK3-203ENST00000454830 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.77
CLK3-203ENST00000454830 JMJD1CQ15652 2540 aa10.27□□□□□ -0.77
CLK3-203ENST00000454830 TEX43Q6ZNM6 134 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 DEFB131AP59861 70 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 C14orf178Q8N769 122 aaPredicted RBP10.26□□□□□ -0.77
CLK3-203ENST00000454830 C18orf15Q96N68 181 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 ESM1Q9NQ30 184 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 PEMTQ9UBM1 199 aa10.26□□□□□ -0.77
CLK3-203ENST00000454830 SRSF2Q01130 221 aaKnown RBP10.26□□□□□ -0.77
CLK3-203ENST00000454830 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
CLK3-203ENST00000454830 TCF21O43680 179 aa10.25□□□□□ -0.77
CLK3-203ENST00000454830 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
CLK3-203ENST00000454830 DLX4Q92988 240 aaPredicted RBP10.25□□□□□ -0.77
CLK3-203ENST00000454830 OR4C46A6NHA9 309 aa10.25□□□□□ -0.77
CLK3-203ENST00000454830 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
CLK3-203ENST00000454830 TCTAP57738 103 aa10.25□□□□□ -0.77
CLK3-203ENST00000454830 F5H697 171 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 ZNF418Q8TF45 676 aaPredicted RBP10.24□□□□□ -0.77
CLK3-203ENST00000454830 NDUFAF3Q9BU61 184 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 K7EQG2 157 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 SMIM17P0DL12 118 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 ZNF575Q86XF7 245 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 ZNF469Q96JG9 3925 aaPredicted RBP10.24□□□□□ -0.77
CLK3-203ENST00000454830 PPBPP02775 128 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 CACNG7P62955 275 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 OR9G4Q8NGQ1 327 aa10.24□□□□□ -0.77
CLK3-203ENST00000454830 LGALS9O00182 355 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 CD5LO43866 347 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 Q8N976 141 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 RNF185Q96GF1 192 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 FOXC2Q99958 501 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 FLNBO75369 2602 aaKnown RBP10.23□□□□□ -0.77
CLK3-203ENST00000454830 FAM74A4Q5TZK3 123 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 TMEM61Q8N0U2 210 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 TMEM86BQ8N661 226 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 DEFB104AQ8WTQ1 72 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 CD28P10747 220 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 ZNF124Q15973 351 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
CLK3-203ENST00000454830 A0A0J9YX75 114 aa10.22□□□□□ -0.77
CLK3-203ENST00000454830 C7orf71A4D174 169 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms