RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TMEM183AQ8IXX5 376 aa19.81■□□□□ 0.76
SMARCC1-203ENST00000454240 KCNS1Q96KK3 526 aa19.81■□□□□ 0.76
SMARCC1-203ENST00000454240 VAX2Q9UIW0 290 aa19.81■□□□□ 0.76
SMARCC1-203ENST00000454240 GNRH2O43555 120 aa19.8■□□□□ 0.76
SMARCC1-203ENST00000454240 TAGLN2P37802 199 aaKnown RBP19.8■□□□□ 0.76
SMARCC1-203ENST00000454240 ZC2HC1AQ96GY0 325 aa19.8■□□□□ 0.76
SMARCC1-203ENST00000454240 FABP5P3A8MUU1 101 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 IGLL5B9A064 214 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 SPINK4O60575 86 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 CRIP1P50238 77 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 TEX261Q6UWH6 196 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 Q6ZTI0 123 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 SDF2L1Q9HCN8 221 aa19.79■□□□□ 0.76
SMARCC1-203ENST00000454240 PDE6DO43924 150 aa19.78■□□□□ 0.76
SMARCC1-203ENST00000454240 TYMSP04818 313 aa19.78■□□□□ 0.76
SMARCC1-203ENST00000454240 TCTAP57738 103 aa19.78■□□□□ 0.76
SMARCC1-203ENST00000454240 IGHV3-16A0A0C4DH30 117 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 GAGE12BA1L429 117 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 GAGE7O76087 117 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 GAGE12FP0CL80 117 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 GAGE12GP0CL81 117 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 GAGE12IP0CL82 117 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 HTN3P15516 51 aa19.77■□□□□ 0.76
SMARCC1-203ENST00000454240 ATP5G1P05496 136 aa19.76■□□□□ 0.75
SMARCC1-203ENST00000454240 RPL35P42766 123 aaKnown RBP19.76■□□□□ 0.75
SMARCC1-203ENST00000454240 LGALS9BQ3B8N2 356 aa19.76■□□□□ 0.75
SMARCC1-203ENST00000454240 MLST8Q9BVC4 326 aa19.76■□□□□ 0.75
SMARCC1-203ENST00000454240 IGHV4-4A0A075B6R2 117 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 TRGV1A0A0A0MS02 117 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 BAGE2Q86Y30 109 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 C18orf15Q96N68 181 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 SPXQ9BT56 116 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 DERL1Q9BUN8 251 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 APLNQ9ULZ1 77 aa19.75■□□□□ 0.75
SMARCC1-203ENST00000454240 ZNF674Q2M3X9 581 aa19.74■□□□□ 0.75
SMARCC1-203ENST00000454240 FAM210BQ96KR6 192 aa19.74■□□□□ 0.75
SMARCC1-203ENST00000454240 IGKV3D-20A0A0C4DH25 116 aa19.73■□□□□ 0.75
SMARCC1-203ENST00000454240 LCE6AA0A183 80 aa19.73■□□□□ 0.75
SMARCC1-203ENST00000454240 FAM162BQ5T6X4 162 aa19.73■□□□□ 0.75
SMARCC1-203ENST00000454240 NHLRC2Q8NBF2 726 aa19.73■□□□□ 0.75
SMARCC1-203ENST00000454240 SACSQ9NZJ4 4579 aa19.72■□□□□ 0.75
SMARCC1-203ENST00000454240 RBFOX3A6NFN3 312 aa19.72■□□□□ 0.75
SMARCC1-203ENST00000454240 SH2D1AO60880 128 aa19.72■□□□□ 0.75
SMARCC1-203ENST00000454240 MRPL16Q9NX20 251 aaKnown RBP19.72■□□□□ 0.75
SMARCC1-203ENST00000454240 MED9Q9NWA0 146 aa19.71■□□□□ 0.75
SMARCC1-203ENST00000454240 ALMS1Q8TCU4 4167 aa19.7■□□□□ 0.74
SMARCC1-203ENST00000454240 DNAH1Q9P2D7 4330 aa19.7■□□□□ 0.74
SMARCC1-203ENST00000454240 F5H768 121 aa19.7■□□□□ 0.74
SMARCC1-203ENST00000454240 ZNF506Q5JVG8 444 aa19.7■□□□□ 0.74
SMARCC1-203ENST00000454240 RASL10AQ92737 203 aa19.7■□□□□ 0.74
SMARCC1-203ENST00000454240 TRGV2A0A075B6R0 118 aa19.69■□□□□ 0.74
SMARCC1-203ENST00000454240 NDUFAF3Q9BU61 184 aa19.69■□□□□ 0.74
SMARCC1-203ENST00000454240 KRBOX1C9JBD0 128 aa19.68■□□□□ 0.74
SMARCC1-203ENST00000454240 ORM1P02763 201 aa19.68■□□□□ 0.74
SMARCC1-203ENST00000454240 TMEM88Q6PEY1 159 aa19.68■□□□□ 0.74
SMARCC1-203ENST00000454240 MUC4Q99102 2169 aa19.68■□□□□ 0.74
SMARCC1-203ENST00000454240 RAB19A4D1S5 217 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 B4DEV8 164 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 M0R2P5 195 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 RNASE3P12724 160 aaKnown RBP19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 CENPWQ5EE01 88 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 ZNF575Q86XF7 245 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 LINC00476Q8WZB0 136 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 C9orf85Q96MD7 179 aa19.67■□□□□ 0.74
SMARCC1-203ENST00000454240 IGLV2-8P01709 118 aa19.66■□□□□ 0.74
SMARCC1-203ENST00000454240 HOXA5P20719 270 aa19.66■□□□□ 0.74
SMARCC1-203ENST00000454240 LINC01559Q495D7 138 aa19.66■□□□□ 0.74
SMARCC1-203ENST00000454240 FAM210AQ96ND0 272 aa19.66■□□□□ 0.74
SMARCC1-203ENST00000454240 DNLZQ5SXM8 178 aa19.65■□□□□ 0.74
SMARCC1-203ENST00000454240 PCNPQ8WW12 178 aaKnown RBP19.65■□□□□ 0.74
SMARCC1-203ENST00000454240 SMIM12Q96EX1 92 aa19.65■□□□□ 0.74
SMARCC1-203ENST00000454240 TRBV20OR9-2A0A075B6H5 130 aa19.64■□□□□ 0.73
SMARCC1-203ENST00000454240 TMEM250H0YL14 139 aa19.64■□□□□ 0.73
SMARCC1-203ENST00000454240 M0R036 132 aa19.64■□□□□ 0.73
SMARCC1-203ENST00000454240 GNG4P50150 75 aa19.64■□□□□ 0.73
SMARCC1-203ENST00000454240 TOR2AQ5JU69 321 aa19.64■□□□□ 0.73
SMARCC1-203ENST00000454240 NDUFS6O75380 124 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-203ENST00000454240 OR5I1Q13606 314 aa19.63■□□□□ 0.73
SMARCC1-203ENST00000454240 LGALS9CQ6DKI2 356 aa19.63■□□□□ 0.73
SMARCC1-203ENST00000454240 EIF5A2Q9GZV4 153 aaKnown RBP19.63■□□□□ 0.73
SMARCC1-203ENST00000454240 ASIPP42127 132 aa19.62■□□□□ 0.73
SMARCC1-203ENST00000454240 PTH2Q96A98 100 aa19.62■□□□□ 0.73
SMARCC1-203ENST00000454240 S100A4P26447 101 aaKnown RBP19.61■□□□□ 0.73
SMARCC1-203ENST00000454240 PRR27Q6MZM9 219 aa19.61■□□□□ 0.73
SMARCC1-203ENST00000454240 C15orf53Q8NAA6 179 aa19.61■□□□□ 0.73
SMARCC1-203ENST00000454240 IL36BQ9NZH7 164 aa19.61■□□□□ 0.73
SMARCC1-203ENST00000454240 LY6G6CO95867 125 aa19.6■□□□□ 0.73
SMARCC1-203ENST00000454240 ZNF876PQ49A33 203 aa19.6■□□□□ 0.73
SMARCC1-203ENST00000454240 POM121L12Q8N7R1 296 aa19.6■□□□□ 0.73
SMARCC1-203ENST00000454240 PARLQ9H300 379 aa19.6■□□□□ 0.73
SMARCC1-203ENST00000454240 NACAE9PAV3 2078 aa19.6■□□□□ 0.73
SMARCC1-203ENST00000454240 GRIFINA4D1Z8 144 aa19.59■□□□□ 0.73
SMARCC1-203ENST00000454240 IGHV3-53P01767 116 aa19.59■□□□□ 0.73
SMARCC1-203ENST00000454240 VPS13DQ5THJ4 4388 aa19.58■□□□□ 0.73
SMARCC1-203ENST00000454240 TRAV26-1A0A087WT03 109 aa19.58■□□□□ 0.72
SMARCC1-203ENST00000454240 TMSB15BA0A087X1C1 80 aa19.58■□□□□ 0.72
SMARCC1-203ENST00000454240 PGPEP1LA6NFU8 196 aa19.58■□□□□ 0.72
SMARCC1-203ENST00000454240 C9JCJ5 164 aa19.58■□□□□ 0.72
SMARCC1-203ENST00000454240 MGST1P10620 155 aaKnown RBP19.58■□□□□ 0.72
SMARCC1-203ENST00000454240 TRAV4A0A0B4J268 109 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms