RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CRYGDP07320 174 aa7.35□□□□□ -1.23
USP1-204ENST00000452143 GCSHP23434 173 aa7.35□□□□□ -1.23
USP1-204ENST00000452143 TIRAPP58753 221 aa7.35□□□□□ -1.23
USP1-204ENST00000452143 RANP62826 216 aaKnown RBP7.35□□□□□ -1.23
USP1-204ENST00000452143 KHDC3LQ587J8 217 aa7.35□□□□□ -1.23
USP1-204ENST00000452143 NTN5Q8WTR8 489 aaPredicted RBP7.35□□□□□ -1.23
USP1-204ENST00000452143 NMES1Q9C002 83 aa7.35□□□□□ -1.23
USP1-204ENST00000452143 DIRC3C9JPN6 131 aa7.34□□□□□ -1.23
USP1-204ENST00000452143 M0R2P5 195 aa7.34□□□□□ -1.23
USP1-204ENST00000452143 TAS2R45P59539 299 aa7.34□□□□□ -1.23
USP1-204ENST00000452143 MZT2BQ6NZ67 158 aa7.34□□□□□ -1.23
USP1-204ENST00000452143 OR4C5Q8NGB2 326 aa7.34□□□□□ -1.23
USP1-204ENST00000452143 ATP5SQ99766 215 aa7.34□□□□□ -1.23
USP1-204ENST00000452143 IGHV3-38A0A0C4DH36 116 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 PSCAO43653 123 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 H2AFB1P0C5Y9 115 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
USP1-204ENST00000452143 ASAH1Q13510 395 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 LRRC37A5PQ49AS3 106 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 LINC01556Q5JQF7 62 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 FAM74A1Q5RGS3 127 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 LINC00299Q6ZSB3 139 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 ARL6IP6Q8N6S5 226 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 TMEM70Q9BUB7 260 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 OR5AC2Q9NZP5 309 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 NDUFA13Q9P0J0 144 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
USP1-204ENST00000452143 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 TRAV21A0A0B4J279 112 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 IGHV3-16A0A0C4DH30 117 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 H0YIZ8 118 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 PET100P0DJ07 73 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 PPT1P50897 306 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 FFAR4Q5NUL3 377 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 Q6ZSN1 163 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 NHLRC2Q8NBF2 726 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 CMTM2Q8TAZ6 248 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 SDF2L1Q9HCN8 221 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 OTORQ9NRC9 128 aa7.32□□□□□ -1.24
USP1-204ENST00000452143 LRCOL1A6NCL2 159 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 IBA57-AS1B1ANH7 110 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 CIDEAO60543 219 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 SIX6O95475 246 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 GATA1P15976 413 aaPredicted RBP7.31□□□□□ -1.24
USP1-204ENST00000452143 Q8N814 137 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 ENKURQ8TC29 256 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 KCNS1Q96KK3 526 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 HYLS1Q96M11 299 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 DNAH8Q96JB1 4490 aa7.31□□□□□ -1.24
USP1-204ENST00000452143 TRAV8-6A0A0B4J262 113 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 LOC100131303A0A0U1RQF7 123 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 FBLL1A6NHQ2 334 aaKnown RBP7.3□□□□□ -1.24
USP1-204ENST00000452143 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
USP1-204ENST00000452143 TYMSP04818 313 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 PFN1P07737 140 aaKnown RBP7.3□□□□□ -1.24
USP1-204ENST00000452143 LAGE3Q14657 143 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 RHOHQ15669 191 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 PQLC2Q6ZP29 291 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 ASB13Q8WXK3 278 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 TREM1Q9NP99 234 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 HSPB11Q9Y547 144 aa7.3□□□□□ -1.24
USP1-204ENST00000452143 SERTM2A0A1B0GWG4 89 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 TRBV6-4A0A1B0GX49 114 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 PGPA6NDG6 321 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 GNRH2O43555 120 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 C1QBP02746 253 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 GOLT1AQ6ZVE7 132 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 SCGB1C1Q8TD33 95 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 PPP1R1CQ8WVI7 109 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 S100ZQ8WXG8 99 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 PRADC1Q9BSG0 188 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 MBD2Q9UBB5 411 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 RPH3ALQ9UNE2 315 aa7.29□□□□□ -1.24
USP1-204ENST00000452143 F6UZH7 168 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 H2BFSP57053 126 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 ZNF876PQ49A33 203 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 OR10J3Q5JRS4 329 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 LELP1Q5T871 98 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 SLC25A29Q8N8R3 303 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 NDFIP1Q9BT67 221 aa7.28□□□□□ -1.24
USP1-204ENST00000452143 TRAV8-1A0A0A6YYK1 113 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 A0A1W2PPV4 95 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 MPC2O95563 127 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 MGST1P10620 155 aaKnown RBP7.27□□□□□ -1.25
USP1-204ENST00000452143 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
USP1-204ENST00000452143 ACOT6Q3I5F7 207 aaPredicted RBP7.27□□□□□ -1.25
USP1-204ENST00000452143 CFAP126Q5VTH2 177 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 TVP23CQ96ET8 276 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 SH3BGRL3Q9H299 93 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 Q9HAA7 133 aa7.27□□□□□ -1.25
USP1-204ENST00000452143 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 RS1O15537 224 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 UPK1BO75841 260 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 HAMPP81172 84 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 PTH2Q96A98 100 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 TM2D2Q9BX73 214 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 SMIM3Q9BZL3 60 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 GTSF1LQ9H1H1 148 aa7.26□□□□□ -1.25
USP1-204ENST00000452143 K7EQM0 130 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms