RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 LGALS9BQ3B8N2 356 aa10.14□□□□□ -0.79
COL3A1-203ENST00000450867 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
COL3A1-203ENST00000450867 LINC00476Q8WZB0 136 aa10.14□□□□□ -0.79
COL3A1-203ENST00000450867 C11orf52Q96A22 123 aa10.14□□□□□ -0.79
COL3A1-203ENST00000450867 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
COL3A1-203ENST00000450867 C11orf21Q9P2W6 132 aa10.14□□□□□ -0.79
COL3A1-203ENST00000450867 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 IGLL5B9A064 214 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 ALKAL2Q6UX46 152 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 Q6ZTI0 123 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 GNG13Q9P2W3 67 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 BOLA1Q9Y3E2 137 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 HYDINQ4G0P3 5121 aa10.13□□□□□ -0.79
COL3A1-203ENST00000450867 KMT2AQ03164 3969 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 SCO2A0A1W2PP80 73 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 AKR1C3P42330 323 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 UBE2G1P62253 170 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 BLOC1S1P78537 153 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 LGALS9CQ6DKI2 356 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 TMEM183AQ8IXX5 376 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 SPXQ9BT56 116 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
COL3A1-203ENST00000450867 IFNA1P01562 189 aa10.11□□□□□ -0.79
COL3A1-203ENST00000450867 TYMSP04818 313 aa10.11□□□□□ -0.79
COL3A1-203ENST00000450867 TAGLN2P37802 199 aaKnown RBP10.11□□□□□ -0.79
COL3A1-203ENST00000450867 MEF2BQ02080 365 aaPredicted RBP10.11□□□□□ -0.79
COL3A1-203ENST00000450867 ZC2HC1AQ96GY0 325 aa10.11□□□□□ -0.79
COL3A1-203ENST00000450867 NDUFAF3Q9BU61 184 aa10.11□□□□□ -0.79
COL3A1-203ENST00000450867 MLST8Q9BVC4 326 aa10.11□□□□□ -0.79
COL3A1-203ENST00000450867 SDF2L1Q9HCN8 221 aa10.11□□□□□ -0.79
COL3A1-203ENST00000450867 GAGE12BA1L429 117 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 FABP5P3A8MUU1 101 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 GAGE7O76087 117 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 GAGE12FP0CL80 117 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 GAGE12GP0CL81 117 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 GAGE12IP0CL82 117 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 BCL2P10415 239 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 RASL10AQ92737 203 aa10.1□□□□□ -0.79
COL3A1-203ENST00000450867 TRGV1A0A0A0MS02 117 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 GNRH2O43555 120 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 PDE6DO43924 150 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 HTN3P15516 51 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 CRIP1P50238 77 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 ZNF674Q2M3X9 581 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 TMEM88Q6PEY1 159 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 NAGKQ9UJ70 344 aa10.09□□□□□ -0.79
COL3A1-203ENST00000450867 IGKV3D-20A0A0C4DH25 116 aa10.08□□□□□ -0.8
COL3A1-203ENST00000450867 DNLZQ5SXM8 178 aa10.08□□□□□ -0.8
COL3A1-203ENST00000450867 C15orf53Q8NAA6 179 aa10.08□□□□□ -0.8
COL3A1-203ENST00000450867 PTH2Q96A98 100 aa10.08□□□□□ -0.8
COL3A1-203ENST00000450867 C9orf85Q96MD7 179 aa10.08□□□□□ -0.8
COL3A1-203ENST00000450867 VAX2Q9UIW0 290 aa10.08□□□□□ -0.8
COL3A1-203ENST00000450867 F5H768 121 aa10.07□□□□□ -0.8
COL3A1-203ENST00000450867 H3BNG1 76 aa10.07□□□□□ -0.8
COL3A1-203ENST00000450867 HOXA5P20719 270 aa10.07□□□□□ -0.8
COL3A1-203ENST00000450867 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
COL3A1-203ENST00000450867 FAM162BQ5T6X4 162 aa10.07□□□□□ -0.8
COL3A1-203ENST00000450867 DERL1Q9BUN8 251 aa10.07□□□□□ -0.8
COL3A1-203ENST00000450867 MRPL16Q9NX20 251 aaKnown RBP10.07□□□□□ -0.8
COL3A1-203ENST00000450867 TRGV2A0A075B6R0 118 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 M0R2P5 195 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 SH2D1AO60880 128 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 NDUFS6O75380 124 aaKnown RBP10.06□□□□□ -0.8
COL3A1-203ENST00000450867 LINC01559Q495D7 138 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 BAGE2Q86Y30 109 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
COL3A1-203ENST00000450867 KRBOX1C9JBD0 128 aa10.05□□□□□ -0.8
COL3A1-203ENST00000450867 RNASE3P12724 160 aaKnown RBP10.05□□□□□ -0.8
COL3A1-203ENST00000450867 PIK3CD-AS1Q5SR53 167 aa10.05□□□□□ -0.8
COL3A1-203ENST00000450867 TEX261Q6UWH6 196 aa10.05□□□□□ -0.8
COL3A1-203ENST00000450867 B4DEV8 164 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 LY6G6CO95867 125 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 IGLV2-8P01709 118 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 P0DMU3 169 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 FAM231AP0DMU4 169 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 FAM231CP0DMU5 169 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 ZNF506Q5JVG8 444 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 POM121L12Q8N7R1 296 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 NHLRC2Q8NBF2 726 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 IL36BQ9NZH7 164 aa10.04□□□□□ -0.8
COL3A1-203ENST00000450867 TRBV20OR9-2A0A075B6H5 130 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 RBFOX3A6NFN3 312 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 TMEM250H0YL14 139 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 ORM1P02763 201 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 CXCL1P09341 107 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 RNF212Q495C1 297 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 CENPWQ5EE01 88 aa10.03□□□□□ -0.8
COL3A1-203ENST00000450867 TRAV26-1A0A087WT03 109 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 ASIPP42127 132 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 SLAQ13239 276 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 OR5I1Q13606 314 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 FHL2Q14192 279 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 VSIG2Q96IQ7 327 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 MED9Q9NWA0 146 aa10.02□□□□□ -0.81
COL3A1-203ENST00000450867 CIDEAO60543 219 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms