RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
SNRNP27-203ENST00000450162 SDF2L1Q9HCN8 221 aa9.25□□□□□ -0.93
SNRNP27-203ENST00000450162 KMT2CQ8NEZ4 4911 aaKnown RBP9.25□□□□□ -0.93
SNRNP27-203ENST00000450162 TRAV34A0A0B4J273 112 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 A0A1B0GV50 99 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 SPINK4O60575 86 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 IFNA1P01562 189 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 HTN3P15516 51 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 AKR1C3P42330 323 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 BLOC1S1P78537 153 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 Q6ZQT7 251 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 Q86TA4 180 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 LINC00476Q8WZB0 136 aa9.24□□□□□ -0.93
SNRNP27-203ENST00000450162 CCL20P78556 96 aa9.23□□□□□ -0.93
SNRNP27-203ENST00000450162 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
SNRNP27-203ENST00000450162 C15orf53Q8NAA6 179 aa9.23□□□□□ -0.93
SNRNP27-203ENST00000450162 C8orf49Q96NF6 230 aa9.23□□□□□ -0.93
SNRNP27-203ENST00000450162 GNG13Q9P2W3 67 aa9.23□□□□□ -0.93
SNRNP27-203ENST00000450162 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
SNRNP27-203ENST00000450162 TRGV2A0A075B6R0 118 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 TRGV1A0A0A0MS02 117 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 GAGE12BA1L429 117 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 F5H768 121 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 GAGE7O76087 117 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 LTAP01374 205 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 GAGE12FP0CL80 117 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 GAGE12GP0CL81 117 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 GAGE12IP0CL82 117 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 Q6ZTI0 123 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 RASL10AQ92737 203 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 MDFICQ9P1T7 246 aa9.22□□□□□ -0.93
SNRNP27-203ENST00000450162 IGHV3-16A0A0C4DH30 117 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 PDE6DO43924 150 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 LY6G6CO95867 125 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 P0DMU3 169 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 FAM231AP0DMU4 169 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 FAM231CP0DMU5 169 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 ZNF80P51504 273 aaPredicted RBP9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 NKX2-5P52952 324 aaPredicted RBP9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 ALKAL2Q6UX46 152 aa9.21□□□□□ -0.94
SNRNP27-203ENST00000450162 SCO2A0A1W2PP80 73 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 H3BNG1 76 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 M0R2P5 195 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 GNRH2O43555 120 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 TYMSP04818 313 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 MEF2BQ02080 365 aaPredicted RBP9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 SLAQ13239 276 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 FAM162BQ5T6X4 162 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 TMEM88Q6PEY1 159 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 C11orf52Q96A22 123 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 VAX2Q9UIW0 290 aa9.2□□□□□ -0.94
SNRNP27-203ENST00000450162 BCL2P10415 239 aa9.19□□□□□ -0.94
SNRNP27-203ENST00000450162 ZNF674Q2M3X9 581 aa9.19□□□□□ -0.94
SNRNP27-203ENST00000450162 BAGE2Q86Y30 109 aa9.19□□□□□ -0.94
SNRNP27-203ENST00000450162 LYPD6BQ8NI32 183 aa9.19□□□□□ -0.94
SNRNP27-203ENST00000450162 C11orf21Q9P2W6 132 aa9.19□□□□□ -0.94
SNRNP27-203ENST00000450162 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
SNRNP27-203ENST00000450162 PLECQ15149 4684 aaKnown RBP9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 CIDEAO60543 219 aa9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 OR5I1Q13606 314 aa9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 PTH2Q96A98 100 aa9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 SMIM12Q96EX1 92 aa9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 ZC2HC1AQ96GY0 325 aa9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 MLST8Q9BVC4 326 aa9.18□□□□□ -0.94
SNRNP27-203ENST00000450162 ORM1P02763 201 aa9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 RPL35P42766 123 aaKnown RBP9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 CRIP1P50238 77 aa9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 RNF212Q495C1 297 aa9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 PIK3CD-AS1Q5SR53 167 aa9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 DNLZQ5SXM8 178 aa9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 MRPL16Q9NX20 251 aaKnown RBP9.17□□□□□ -0.94
SNRNP27-203ENST00000450162 IGKV3D-20A0A0C4DH25 116 aa9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 B4DEV8 164 aa9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 SH2D1AO60880 128 aa9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 S100A4P26447 101 aaKnown RBP9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 ASIPP42127 132 aa9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 FAM3BP58499 235 aaPredicted RBP9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 C9orf85Q96MD7 179 aa9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 MED9Q9NWA0 146 aa9.16□□□□□ -0.94
SNRNP27-203ENST00000450162 TRAV26-1A0A087WT03 109 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 TRAV4A0A0B4J268 109 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 KRBOX1C9JBD0 128 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 NDUFS6O75380 124 aaKnown RBP9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 HOXA5P20719 270 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 ZNF876PQ49A33 203 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 POM121L12Q8N7R1 296 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 BIN3Q9NQY0 253 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 IL36BQ9NZH7 164 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
SNRNP27-203ENST00000450162 RBFOX3A6NFN3 312 aa9.14□□□□□ -0.95
SNRNP27-203ENST00000450162 TMEM250H0YL14 139 aa9.14□□□□□ -0.95
SNRNP27-203ENST00000450162 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
SNRNP27-203ENST00000450162 OR4C5Q8NGB2 326 aa9.14□□□□□ -0.95
SNRNP27-203ENST00000450162 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
SNRNP27-203ENST00000450162 SACSQ9NZJ4 4579 aa9.14□□□□□ -0.95
SNRNP27-203ENST00000450162 MUC4Q99102 2169 aa9.13□□□□□ -0.95
SNRNP27-203ENST00000450162 TRGV4A0A0C4DH28 118 aa9.13□□□□□ -0.95
SNRNP27-203ENST00000450162 NUDT3O95989 172 aa9.13□□□□□ -0.95
SNRNP27-203ENST00000450162 CXCL1P09341 107 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms