RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 TCRAP04437 139 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 SFTA3P0C7M3 94 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 SUMO1P63165 101 aaKnown RBP10.52□□□□□ -0.73
CHD3-205ENST00000449744 ZNF575Q86XF7 245 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 SUN5Q8TC36 379 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
CHD3-205ENST00000449744 ZNF479Q96JC4 524 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 KRTAP1-5Q9BYS1 174 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 DNAH11Q96DT5 4516 aa10.52□□□□□ -0.73
CHD3-205ENST00000449744 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 M0R2P5 195 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 SIVA1O15304 175 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 TYMSP04818 313 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 ZFP69Q49AA0 526 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 NEGR1Q7Z3B1 354 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 OR4C5Q8NGB2 326 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 PSG8Q9UQ74 426 aa10.51□□□□□ -0.73
CHD3-205ENST00000449744 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
CHD3-205ENST00000449744 C16orf90A8MZG2 172 aa10.5□□□□□ -0.73
CHD3-205ENST00000449744 NXPH4O95158 308 aa10.5□□□□□ -0.73
CHD3-205ENST00000449744 BTF3P20290 206 aaKnown RBP10.5□□□□□ -0.73
CHD3-205ENST00000449744 SRIP30626 198 aa10.5□□□□□ -0.73
CHD3-205ENST00000449744 CYB561D1Q8N8Q1 229 aa10.5□□□□□ -0.73
CHD3-205ENST00000449744 EPDR1Q9UM22 224 aa10.5□□□□□ -0.73
CHD3-205ENST00000449744 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
CHD3-205ENST00000449744 TAAR5O14804 337 aa10.49□□□□□ -0.73
CHD3-205ENST00000449744 GCGP01275 180 aa10.49□□□□□ -0.73
CHD3-205ENST00000449744 ORM1P02763 201 aa10.49□□□□□ -0.73
CHD3-205ENST00000449744 FLI1Q01543 452 aaPredicted RBP10.49□□□□□ -0.73
CHD3-205ENST00000449744 LYPD5Q6UWN5 251 aa10.49□□□□□ -0.73
CHD3-205ENST00000449744 PRNTQ86SH4 94 aa10.49□□□□□ -0.73
CHD3-205ENST00000449744 DYNC1H1Q14204 4646 aaKnown RBP10.49□□□□□ -0.73
CHD3-205ENST00000449744 PKD1P98161 4303 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 CTXND1A0A1B0GTU2 59 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 K7EQD1 137 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 GYPEP15421 78 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 SAPCD1Q5SSQ6 148 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 AKR1C8PQ5T2L2 129 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
CHD3-205ENST00000449744 C9JCJ5 164 aa10.47□□□□□ -0.73
CHD3-205ENST00000449744 ARPC5O15511 151 aa10.47□□□□□ -0.73
CHD3-205ENST00000449744 IFNA7P01567 189 aa10.47□□□□□ -0.73
CHD3-205ENST00000449744 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
CHD3-205ENST00000449744 ZNF80P51504 273 aaPredicted RBP10.47□□□□□ -0.73
CHD3-205ENST00000449744 TXNDC17Q9BRA2 123 aa10.47□□□□□ -0.73
CHD3-205ENST00000449744 IGLV2-11P01706 119 aa10.46□□□□□ -0.73
CHD3-205ENST00000449744 PPT1P50897 306 aa10.46□□□□□ -0.73
CHD3-205ENST00000449744 LINC00315P59091 139 aa10.46□□□□□ -0.73
CHD3-205ENST00000449744 UBE2G2P60604 165 aa10.46□□□□□ -0.73
CHD3-205ENST00000449744 ZNF726P1Q15940 193 aa10.46□□□□□ -0.73
CHD3-205ENST00000449744 RYR1P21817 5038 aa10.45□□□□□ -0.74
CHD3-205ENST00000449744 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
CHD3-205ENST00000449744 ZNF876PQ49A33 203 aa10.45□□□□□ -0.74
CHD3-205ENST00000449744 SPATA12Q7Z6I5 190 aa10.45□□□□□ -0.74
CHD3-205ENST00000449744 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
CHD3-205ENST00000449744 LY96Q9Y6Y9 160 aa10.45□□□□□ -0.74
CHD3-205ENST00000449744 G3V3Q6 166 aa10.44□□□□□ -0.74
CHD3-205ENST00000449744 FGF8P55075 233 aaPredicted RBP10.44□□□□□ -0.74
CHD3-205ENST00000449744 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
CHD3-205ENST00000449744 NHLRC2Q8NBF2 726 aa10.44□□□□□ -0.74
CHD3-205ENST00000449744 NKX6-2Q9C056 277 aaPredicted RBP10.44□□□□□ -0.74
CHD3-205ENST00000449744 TRAV34A0A0B4J273 112 aa10.43□□□□□ -0.74
CHD3-205ENST00000449744 PEX7O00628 323 aa10.43□□□□□ -0.74
CHD3-205ENST00000449744 CIDEAO60543 219 aa10.43□□□□□ -0.74
CHD3-205ENST00000449744 GATA1P15976 413 aaPredicted RBP10.43□□□□□ -0.74
CHD3-205ENST00000449744 LINC00479Q96M42 142 aa10.43□□□□□ -0.74
CHD3-205ENST00000449744 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
CHD3-205ENST00000449744 LOC100131303A0A0U1RQF7 123 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 MAP1LC3B2A6NCE7 125 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 FAM74A7A6NL05 159 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 SMLR1H3BR10 107 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 RS1O15537 224 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 EVI2AP22794 236 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 S100A4P26447 101 aaKnown RBP10.42□□□□□ -0.74
CHD3-205ENST00000449744 NFE4Q86UQ8 179 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 STOML3Q8TAV4 291 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 HIST1H2BAQ96A08 127 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 PRADC1Q9BSG0 188 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 MAP1LC3BQ9GZQ8 125 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 CYTL1Q9NRR1 136 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 ARL2-SNX15V9GYD0 113 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 PKHD1P08F94 4074 aa10.42□□□□□ -0.74
CHD3-205ENST00000449744 FABP5P3A8MUU1 101 aa10.41□□□□□ -0.74
CHD3-205ENST00000449744 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
CHD3-205ENST00000449744 WFDC10BQ8IUB3 73 aa10.41□□□□□ -0.74
CHD3-205ENST00000449744 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 PGPEP1LA6NFU8 196 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 K7EP13 123 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 EREGO14944 169 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 RNASE3P12724 160 aaKnown RBP10.4□□□□□ -0.74
CHD3-205ENST00000449744 UBE2G1P62253 170 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 RHOHQ15669 191 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 ZNF506Q5JVG8 444 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 DPPA3Q6W0C5 159 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 Q86TA4 180 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 PTH2Q96A98 100 aa10.4□□□□□ -0.74
CHD3-205ENST00000449744 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms