RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 HLA-DQA1P01909 254 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 ARMS2P0C7Q2 107 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 FHL3Q13643 280 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 C10orf126Q8N4M7 172 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 C5orf30Q96GV9 206 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 PRO0255Q9UI72 69 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 SNAPINO95295 136 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 RPL35P42766 123 aaKnown RBP6.35□□□□□ -1.39
HCG18-238ENST00000449544 ANXA2RQ3ZCQ2 193 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 NAT8Q9UHE5 227 aa6.35□□□□□ -1.39
HCG18-238ENST00000449544 TMEM263Q8WUH6 116 aaKnown RBP6.35□□□□□ -1.39
HCG18-238ENST00000449544 TRBV25-1A0A075B6N4 114 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 C20orf202A1L168 122 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 K7EIL1 84 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 ZNF561-AS1K7EIQ3 104 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 SNCGO76070 127 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 TMEM97Q5BJF2 176 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 MRPL53Q96EL3 112 aaKnown RBP6.34□□□□□ -1.39
HCG18-238ENST00000449544 ST20Q9HBF5 79 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 TRAV2A0A0B4J234 112 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 HSBP1O75506 76 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 CACNG7P62955 275 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 RNF212Q495C1 297 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 C14orf178Q8N769 122 aaPredicted RBP6.34□□□□□ -1.39
HCG18-238ENST00000449544 OR5A1Q8NGJ0 315 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 ANAPC10Q9UM13 185 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 CRYGBP07316 175 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 ASPHD1Q5U4P2 390 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 ATP6V0E2Q8NHE4 81 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 AGPAT4-IT1Q9H0P7 198 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 SAV1Q9H4B6 383 aaPredicted RBP6.34□□□□□ -1.39
HCG18-238ENST00000449544 ZNF580Q9UK33 172 aa6.34□□□□□ -1.39
HCG18-238ENST00000449544 Q6ZQT7 251 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 CRXO43186 299 aaPredicted RBP6.33□□□□□ -1.4
HCG18-238ENST00000449544 RAB5BP61020 215 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 Q5BKY6 102 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 MYOZ3Q8TDC0 251 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 TCEAL7Q9BRU2 100 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 STAG3L2P0CL84 134 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 STAG3L3P0CL85 134 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 FHITP49789 147 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 SAMD5Q5TGI4 173 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 C17orf77Q96MU5 243 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 LY96Q9Y6Y9 160 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 F2Z2F3 143 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 ZNF345Q14585 488 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 FAM74A3Q4VXF1 159 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 C20orf144Q9BQM9 153 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
HCG18-238ENST00000449544 A0A1B0GUT8 65 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 EGR2P11161 476 aaPredicted RBP6.32□□□□□ -1.4
HCG18-238ENST00000449544 ODF3L2Q3SX64 289 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 SVBPQ8N300 66 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 ZNF414Q96IQ9 312 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 GAGE6Q13070 117 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 DEFB104AQ8WTQ1 72 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 CHAC2Q8WUX2 184 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 VSIRQ9H7M9 311 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 APOMO95445 188 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 SS18Q15532 418 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 GFI1BQ5VTD9 330 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 APCP25054 2843 aa6.32□□□□□ -1.4
HCG18-238ENST00000449544 A0A087WWC5 75 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 KPRPQ5T749 579 aaPredicted RBP6.31□□□□□ -1.4
HCG18-238ENST00000449544 MRPL36Q9P0J6 103 aaKnown RBP6.31□□□□□ -1.4
HCG18-238ENST00000449544 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
HCG18-238ENST00000449544 ZNF324O75467 553 aaPredicted RBP6.31□□□□□ -1.4
HCG18-238ENST00000449544 Q6AWC8 147 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 TMEM14CQ9P0S9 112 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 SH2D1AO60880 128 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 CRISP2P16562 243 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 TMEM37Q8WXS4 190 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 SEC11CQ9BY50 192 aa6.31□□□□□ -1.4
HCG18-238ENST00000449544 H3BQ15 152 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 GZMBP10144 247 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 MRAP2Q96G30 205 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 RPP21Q9H633 154 aaKnown RBP6.3□□□□□ -1.4
HCG18-238ENST00000449544 PLA2G2EQ9NZK7 142 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 IGKV3D-20A0A0C4DH25 116 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 IGHV3-38A0A0C4DH36 116 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 INS-IGF2F8WCM5 200 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 AKR1D1P51857 326 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 C1orf134Q5TEV5 83 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 CLPSL2Q6UWE3 100 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 Q6ZTC4 211 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 RAB19A4D1S5 217 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 H0YIZ8 118 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 TCAPO15273 167 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 SIVA1O15304 175 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 CRIP2P52943 208 aaPredicted RBP6.3□□□□□ -1.4
HCG18-238ENST00000449544 CEMP1Q6PRD7 247 aaPredicted RBP6.3□□□□□ -1.4
HCG18-238ENST00000449544 TMEM243Q9BU79 118 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 TGIF2-C20orf24A0A0A6YYL0 155 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 LENEPQ9Y5L5 61 aa6.3□□□□□ -1.4
HCG18-238ENST00000449544 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms