RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 XKRY2A2RUG3 117 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 A8MWL6 223 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 ORM1P02763 201 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 RPL35AP18077 110 aaKnown RBP9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TCL1AP56279 114 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 RPS20P60866 119 aaKnown RBP9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 ELOBQ15370 118 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 YPEL4Q96NS1 127 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 NEU1Q99519 415 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 GFRA4Q9GZZ7 299 aa9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 ZMAT5Q9UDW3 170 aaKnown RBP9.32□□□□□ -0.92
HLA-DRB9-201ENST00000449413 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 CXCL1P09341 107 aa9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 RBMY1A1P0DJD3 496 aaKnown RBP9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 RBMY1CP0DJD4 496 aa9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 GZMBP10144 247 aa9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 KRTAP10-11P60412 298 aa9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 RBMY1FQ15415 496 aaKnown RBP9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 Q8N1Y9 231 aa9.31□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TRAV9-1A0A075B6T8 112 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 FAM231BA6NCW3 169 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 ZNF324O75467 553 aaPredicted RBP9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 FAM3BP58499 235 aaPredicted RBP9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 MUC21Q5SSG8 566 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 GTSF1Q8WW33 167 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 C20orf144Q9BQM9 153 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
HLA-DRB9-201ENST00000449413 EPPK1P58107 5090 aaKnown RBP9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TGIF2-C20orf24A0A0A6YYL0 155 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 CTRLP40313 264 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 ANXA2RQ3ZCQ2 193 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 FAM159AQ6UWV7 190 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 KCNS1Q96KK3 526 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 C1QTNF4Q9BXJ3 329 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 XCL2Q9UBD3 114 aa9.29□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TRBV24-1A0A075B6N3 115 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 GRIFINA4D1Z8 144 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TYMSP04818 313 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 IGLC6P0CF74 106 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 ASIPP42127 132 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 FER1L6-AS1Q8NA97 138 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 NUP35Q8NFH5 326 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 BTF3L4Q96K17 158 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 DNAH9Q9NYC9 4486 aa9.28□□□□□ -0.92
HLA-DRB9-201ENST00000449413 LOC102724200A0A096LPH7 203 aaPredicted RBP9.27□□□□□ -0.93
HLA-DRB9-201ENST00000449413 GIG44P09565 113 aaPredicted RBP9.27□□□□□ -0.93
HLA-DRB9-201ENST00000449413 TMEM256Q8N2U0 113 aa9.27□□□□□ -0.93
HLA-DRB9-201ENST00000449413 PGLYRP4Q96LB8 373 aa9.27□□□□□ -0.93
HLA-DRB9-201ENST00000449413 PYGO2Q9BRQ0 406 aa9.27□□□□□ -0.93
HLA-DRB9-201ENST00000449413 TPPP3Q9BW30 176 aa9.27□□□□□ -0.93
HLA-DRB9-201ENST00000449413 TRGV11A0A075B6L2 103 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 COLCA2A8K830 154 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 H3BVH4 76 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 IGHV4-30-4P0DP06 118 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 MED14OSP0DP75 135 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 DNLZQ5SXM8 178 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 MRPL54Q6P161 138 aaKnown RBP9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 FAM210BQ96KR6 192 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 LINC00467Q9BRT7 94 aa9.26□□□□□ -0.93
HLA-DRB9-201ENST00000449413 DYNC2H1Q8NCM8 4307 aaKnown RBP9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 RYR2Q92736 4967 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 KIR2DL5BA0A0G2JPC4 375 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 SNAI2O43623 268 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 SPINK4O60575 86 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 ARMS2P0C7Q2 107 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 APOC4P55056 127 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 LYZL1Q6UWQ5 148 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 C1orf158Q8N1D5 194 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 KIR2DL5BQ8NHK3 375 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 BORCS7Q96B45 105 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 TMEM208Q9BTX3 173 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 CSTL1Q9H114 145 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 GOLT1BQ9Y3E0 138 aa9.25□□□□□ -0.93
HLA-DRB9-201ENST00000449413 A0A1B0GUT8 65 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 A0A1B0GXF2 115 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 CBY3A6NI87 242 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 OR5AL1P0C617 328 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 RNASE3P12724 160 aaKnown RBP9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 RAB5AP20339 215 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 S100A4P26447 101 aaKnown RBP9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 CSNK1G2-AS1Q8NCQ2 148 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 LINC01587Q99440 93 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 CNFNQ9BYD5 112 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 TP53TG3Q9ULZ0 132 aa9.24□□□□□ -0.93
HLA-DRB9-201ENST00000449413 IGHV3OR16-12A0A075B7B8 117 aa9.23□□□□□ -0.93
HLA-DRB9-201ENST00000449413 IGHV3-16A0A0C4DH30 117 aa9.23□□□□□ -0.93
HLA-DRB9-201ENST00000449413 A8MZ25 164 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms