RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 IGHV3-73A0A0B4J1V6 119 aa11.94□□□□□ -0.5
CHCHD3-203ENST00000448878 RAB32Q13637 225 aa11.94□□□□□ -0.5
CHCHD3-203ENST00000448878 Q6ZSA8 131 aa11.94□□□□□ -0.5
CHCHD3-203ENST00000448878 SLC25A29Q8N8R3 303 aa11.94□□□□□ -0.5
CHCHD3-203ENST00000448878 SEC22CQ9BRL7 303 aa11.94□□□□□ -0.5
CHCHD3-203ENST00000448878 TRAV6A0A075B6T7 132 aa11.93□□□□□ -0.5
CHCHD3-203ENST00000448878 LELP1Q5T871 98 aa11.93□□□□□ -0.5
CHCHD3-203ENST00000448878 LENEPQ9Y5L5 61 aa11.93□□□□□ -0.5
CHCHD3-203ENST00000448878 A6NHS1 94 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 DIRC3C9JPN6 131 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 RHOHQ15669 191 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 SCXQ7RTU7 201 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 ATP5SQ99766 215 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 SDF2L1Q9HCN8 221 aa11.92□□□□□ -0.5
CHCHD3-203ENST00000448878 TRAV21A0A0B4J279 112 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 RBFOX3A6NFN3 312 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 TYMSP04818 313 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 UBE2L3P68036 154 aaKnown RBP11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 NHLH2Q02577 135 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 LAGE3Q14657 143 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 TDRG1Q3Y452 100 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 BAALCQ8WXS3 180 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 GTSF1LQ9H1H1 148 aa11.91□□□□□ -0.5
CHCHD3-203ENST00000448878 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 F6UZH7 168 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 OXTP01178 125 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 ZNF876PQ49A33 203 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 Q8N3U1 123 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 OR5C1Q8NGR4 320 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 CMTM2Q8TAZ6 248 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 NMES1Q9C002 83 aa11.9□□□□□ -0.5
CHCHD3-203ENST00000448878 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
CHCHD3-203ENST00000448878 KCNS1Q96KK3 526 aa11.89□□□□□ -0.51
CHCHD3-203ENST00000448878 SDHCQ99643 169 aaPredicted RBP11.89□□□□□ -0.51
CHCHD3-203ENST00000448878 KCNIP2Q9NS61 270 aa11.89□□□□□ -0.51
CHCHD3-203ENST00000448878 PGPA6NDG6 321 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 C17orf112F2Z3M2 114 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 TCRBP04435 133 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 IL7P13232 177 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 CFAP126Q5VTH2 177 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 TREM1Q9NP99 234 aa11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
CHCHD3-203ENST00000448878 GGTLC3B5MD39 225 aa11.87□□□□□ -0.51
CHCHD3-203ENST00000448878 TOR2AQ5JU69 321 aa11.87□□□□□ -0.51
CHCHD3-203ENST00000448878 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
CHCHD3-203ENST00000448878 RBM38Q9H0Z9 239 aaKnown RBP11.87□□□□□ -0.51
CHCHD3-203ENST00000448878 UBR4Q5T4S7 5183 aa11.87□□□□□ -0.51
CHCHD3-203ENST00000448878 RS1O15537 224 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 LYRM1O43325 122 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 CIDEAO60543 219 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 TMED6Q8WW62 240 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 WDR61Q9GZS3 305 aaKnown RBP11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 NUDT15Q9NV35 164 aa11.86□□□□□ -0.51
CHCHD3-203ENST00000448878 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 PLA2G10O15496 165 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 EIF3GO75821 320 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 IL15RAQ13261 267 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 KHDC3LQ587J8 217 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 DPPA3Q6W0C5 159 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 CIRBP-AS1Q8TBR5 109 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 COX11Q9Y6N1 276 aa11.85□□□□□ -0.51
CHCHD3-203ENST00000448878 TRAV8-1A0A0A6YYK1 113 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 MGST1P10620 155 aaKnown RBP11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 TAS2R45P59539 299 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 GAGE1Q13065 139 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 GAGE4Q13068 117 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 GAGE5Q13069 117 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 GAGE13Q4V321 117 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 Q8N976 141 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 OTORQ9NRC9 128 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 MBD2Q9UBB5 411 aa11.84□□□□□ -0.51
CHCHD3-203ENST00000448878 IGKV2D-24A0A075B6R9 120 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 H2AFB2P0C5Z0 115 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 ACOT6Q3I5F7 207 aaPredicted RBP11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 LRRC37A5PQ49AS3 106 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 RMI2Q96E14 147 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 SGK494Q96LW2 274 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 URGCP-MRPS24S4R325 110 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 HMCN2Q8NDA2 5059 aa11.83□□□□□ -0.52
CHCHD3-203ENST00000448878 PGPEP1LA6NFU8 196 aa11.82□□□□□ -0.52
CHCHD3-203ENST00000448878 ASAH1Q13510 395 aa11.82□□□□□ -0.52
CHCHD3-203ENST00000448878 NDFIP1Q9BT67 221 aa11.82□□□□□ -0.52
CHCHD3-203ENST00000448878 KRTAP10-4P60372 401 aaPredicted RBP11.81□□□□□ -0.52
CHCHD3-203ENST00000448878 GNG5P63218 68 aa11.81□□□□□ -0.52
CHCHD3-203ENST00000448878 OR5AC2Q9NZP5 309 aa11.81□□□□□ -0.52
CHCHD3-203ENST00000448878 LRP1Q07954 4544 aaKnown RBP11.81□□□□□ -0.52
CHCHD3-203ENST00000448878 SIX6O95475 246 aa11.8□□□□□ -0.52
CHCHD3-203ENST00000448878 ZNF506Q5JVG8 444 aa11.8□□□□□ -0.52
CHCHD3-203ENST00000448878 OR2T35Q8NGX2 323 aa11.8□□□□□ -0.52
CHCHD3-203ENST00000448878 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms