RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SDF2L1Q9HCN8 221 aa9.96□□□□□ -0.82
GTF3C3-206ENST00000448539 KLF12Q9Y4X4 402 aa9.96□□□□□ -0.82
GTF3C3-206ENST00000448539 IGHV4-4A0A075B6R2 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 GAGE12BA1L429 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 GAGE7O76087 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 ATP5G1P05496 136 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 GAGE12FP0CL80 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 GAGE12GP0CL81 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 GAGE12IP0CL82 117 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 TAGLN2P37802 199 aaKnown RBP9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 ZNF80P51504 273 aaPredicted RBP9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 TDRG1Q3Y452 100 aa9.95□□□□□ -0.82
GTF3C3-206ENST00000448539 TRGV2A0A075B6R0 118 aa9.94□□□□□ -0.82
GTF3C3-206ENST00000448539 TRBV6-1A0A0K0K1D8 114 aa9.94□□□□□ -0.82
GTF3C3-206ENST00000448539 FABP5P3A8MUU1 101 aa9.94□□□□□ -0.82
GTF3C3-206ENST00000448539 FAM210BQ96KR6 192 aa9.94□□□□□ -0.82
GTF3C3-206ENST00000448539 NDUFAF3Q9BU61 184 aa9.94□□□□□ -0.82
GTF3C3-206ENST00000448539 F5H768 121 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 GNRH2O43555 120 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 PDE6DO43924 150 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 LTAP01374 205 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 BCL2P10415 239 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 MEF2BQ02080 365 aaPredicted RBP9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 Q6ZTI0 123 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 SPXQ9BT56 116 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 MDFICQ9P1T7 246 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 VAX2Q9UIW0 290 aa9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 EPPK1P58107 5090 aaKnown RBP9.93□□□□□ -0.82
GTF3C3-206ENST00000448539 HYDINQ4G0P3 5121 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 SPINK4O60575 86 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 TYMSP04818 313 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 LGALS9BQ3B8N2 356 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 FAM162BQ5T6X4 162 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 BAGE2Q86Y30 109 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 LINC00612Q8N6U2 182 aa9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 PLECQ15149 4684 aaKnown RBP9.92□□□□□ -0.82
GTF3C3-206ENST00000448539 IGHV3-16A0A0C4DH30 117 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 LY6G6CO95867 125 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 COX8CQ7Z4L0 72 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 C11orf52Q96A22 123 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 ZC2HC1AQ96GY0 325 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 MED9Q9NWA0 146 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 APLNQ9ULZ1 77 aa9.91□□□□□ -0.82
GTF3C3-206ENST00000448539 ORM1P02763 201 aa9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 S100A4P26447 101 aaKnown RBP9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 RPL35P42766 123 aaKnown RBP9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 OR5I1Q13606 314 aa9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 TMEM88Q6PEY1 159 aa9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 NHLRC2Q8NBF2 726 aa9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 LINC00476Q8WZB0 136 aa9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 C11orf21Q9P2W6 132 aa9.9□□□□□ -0.82
GTF3C3-206ENST00000448539 B4DEV8 164 aa9.89□□□□□ -0.83
GTF3C3-206ENST00000448539 M0R2P5 195 aa9.89□□□□□ -0.83
GTF3C3-206ENST00000448539 SH2D1AO60880 128 aa9.89□□□□□ -0.83
GTF3C3-206ENST00000448539 C18orf15Q96N68 181 aa9.89□□□□□ -0.83
GTF3C3-206ENST00000448539 RBFOX3A6NFN3 312 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 ASIPP42127 132 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 ZNF674Q2M3X9 581 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 LGALS9CQ6DKI2 356 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 TEX261Q6UWH6 196 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
GTF3C3-206ENST00000448539 IGKV3D-20A0A0C4DH25 116 aa9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 M0R036 132 aa9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 IGHV3-53P01767 116 aa9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 GNG4P50150 75 aa9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 CRIP1P50238 77 aa9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 RASL10AQ92737 203 aa9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 EIF5A2Q9GZV4 153 aaKnown RBP9.87□□□□□ -0.83
GTF3C3-206ENST00000448539 P0DMU3 169 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 FAM231AP0DMU4 169 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 FAM231CP0DMU5 169 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 CENPWQ5EE01 88 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 ZNF506Q5JVG8 444 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 PRR27Q6MZM9 219 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 MLST8Q9BVC4 326 aa9.86□□□□□ -0.83
GTF3C3-206ENST00000448539 ALMS1Q8TCU4 4167 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 TRAV26-1A0A087WT03 109 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 TMSB15BA0A087X1C1 80 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 RAB19A4D1S5 217 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 KRBOX1C9JBD0 128 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 C9JCJ5 164 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 NUDT3O95989 172 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 HOXA5P20719 270 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 LINC01559Q495D7 138 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 TOR2AQ5JU69 321 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 OR4C5Q8NGB2 326 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 DAZAP1Q96EP5 407 aaKnown RBP9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 C9orf85Q96MD7 179 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 BIN3Q9NQY0 253 aa9.85□□□□□ -0.83
GTF3C3-206ENST00000448539 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.83
GTF3C3-206ENST00000448539 TRGV4A0A0C4DH28 118 aa9.84□□□□□ -0.83
GTF3C3-206ENST00000448539 A0A0J9YY99 117 aa9.84□□□□□ -0.83
GTF3C3-206ENST00000448539 GRIFINA4D1Z8 144 aa9.84□□□□□ -0.83
GTF3C3-206ENST00000448539 RNASE3P12724 160 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms