RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 BPESC1Q9GZL8 116 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 A0A0G2JLM5 398 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 CLPSL1A2RUU4 121 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 UBE2E1P51965 193 aa9.92□□□□□ -0.82
SHC1-210ENST00000448116 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
SHC1-210ENST00000448116 OR4X2Q8NGF9 303 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 OR2K2Q8NGT1 345 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 KLK15Q9H2R5 256 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 H3BRM9 83 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 H3BVH4 76 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 K7EMI3 77 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 SMIM17P0DL12 118 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 DEFB1P60022 68 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 ATP5G2Q06055 141 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
SHC1-210ENST00000448116 MAP1AP78559 2803 aaPredicted RBP9.9□□□□□ -0.82
SHC1-210ENST00000448116 TRAV8-2A0A0B4J237 113 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 IGKCP01834 107 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 IGF1P05019 195 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 ADAMTSL5Q6ZMM2 481 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 TRAV40A0A0B4J280 105 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 TMEM8BA6NDV4 472 aa9.9□□□□□ -0.82
SHC1-210ENST00000448116 CENPVL3A0A0U1RRI6 287 aa9.9□□□□□ -0.83
SHC1-210ENST00000448116 M0R381 172 aa9.9□□□□□ -0.83
SHC1-210ENST00000448116 MYOZ3Q8TDC0 251 aa9.9□□□□□ -0.83
SHC1-210ENST00000448116 EFNA4P52798 201 aa9.89□□□□□ -0.83
SHC1-210ENST00000448116 NPFFO15130 113 aa9.89□□□□□ -0.83
SHC1-210ENST00000448116 TSPAN13O95857 204 aa9.89□□□□□ -0.83
SHC1-210ENST00000448116 BRD3OSQ6XYD6 125 aa9.89□□□□□ -0.83
SHC1-210ENST00000448116 Q8N8P6 123 aa9.89□□□□□ -0.83
SHC1-210ENST00000448116 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
SHC1-210ENST00000448116 S100A4P26447 101 aaKnown RBP9.88□□□□□ -0.83
SHC1-210ENST00000448116 MRPL35Q9NZE8 188 aaKnown RBP9.88□□□□□ -0.83
SHC1-210ENST00000448116 DPM2O94777 84 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 GLMPQ8WWB7 406 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 AJUBAQ96IF1 538 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 SPCS1Q9Y6A9 102 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 K7ERJ3 54 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 IGHV3-11P01762 117 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 FXYD2P54710 66 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 SRSF2Q01130 221 aaKnown RBP9.88□□□□□ -0.83
SHC1-210ENST00000448116 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
SHC1-210ENST00000448116 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 LY6DQ14210 128 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 LY6EQ16553 131 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 SMIM13P0DJ93 91 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 LAGE3Q14657 143 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 DEFB104AQ8WTQ1 72 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 CITED2Q99967 270 aaPredicted RBP9.87□□□□□ -0.83
SHC1-210ENST00000448116 TRBV7-1A0A0A6YYK4 115 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 TRAV41A0A0B4J266 112 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 IGHV7-4-1A0A0J9YVY3 117 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 PRR9Q5T870 116 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
SHC1-210ENST00000448116 TRBV12-3P01733 135 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 LMO4P61968 165 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 MRAP2Q96G30 205 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 NHP2Q9NX24 153 aaKnown RBP9.86□□□□□ -0.83
SHC1-210ENST00000448116 ATP5LO75964 103 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 K7EP34 96 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 MGPP08493 103 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 UNQ9165/PRO28630Q6UXU0 137 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 C5orf56Q8N8D9 126 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
SHC1-210ENST00000448116 FABP2P12104 132 aa9.85□□□□□ -0.83
SHC1-210ENST00000448116 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
SHC1-210ENST00000448116 A0A1W2PPM0 123 aa9.85□□□□□ -0.83
SHC1-210ENST00000448116 LCNL1Q6ZST4 164 aa9.85□□□□□ -0.83
SHC1-210ENST00000448116 CSPG4Q6UVK1 2322 aa9.85□□□□□ -0.83
SHC1-210ENST00000448116 F6UB75 175 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 SCGB1A1P11684 91 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 SRSF1Q07955 248 aaKnown RBP eCLIP9.84□□□□□ -0.839e-9■■■□□ 14.8
SHC1-210ENST00000448116 C14orf178Q8N769 122 aaPredicted RBP9.84□□□□□ -0.83
SHC1-210ENST00000448116 NRACQ8N912 160 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 PSMG3-AS1Q96PY0 264 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 IGLV2-18A0A075B6J9 118 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 TRAV25A0A0B4J276 109 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 SRD5A1P18405 259 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 UFSP1Q6NVU6 142 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 RNASE4P34096 147 aaKnown RBP9.84□□□□□ -0.83
SHC1-210ENST00000448116 UCNP55089 124 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 MAPKAPK5-AS1Q8N8E1 139 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 OR10J6PQ8NGY7 276 aa9.84□□□□□ -0.83
SHC1-210ENST00000448116 PHLDA3Q9Y5J5 127 aa9.83□□□□□ -0.84
SHC1-210ENST00000448116 TEX48A0A1B0GUV7 120 aa9.83□□□□□ -0.84
SHC1-210ENST00000448116 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
SHC1-210ENST00000448116 MRPL23Q16540 153 aaKnown RBP9.83□□□□□ -0.84
SHC1-210ENST00000448116 ZMAT4Q9H898 229 aa9.83□□□□□ -0.84
SHC1-210ENST00000448116 RPL39LQ96EH5 51 aaKnown RBP9.83□□□□□ -0.84
SHC1-210ENST00000448116 MOB4Q9Y3A3 225 aa9.83□□□□□ -0.84
SHC1-210ENST00000448116 CREBBPQ92793 2442 aa9.82□□□□□ -0.84
SHC1-210ENST00000448116 SCGB3A1Q96QR1 104 aa9.82□□□□□ -0.84
SHC1-210ENST00000448116 PIEZO1Q92508 2521 aa9.82□□□□□ -0.84
SHC1-210ENST00000448116 CELSR1Q9NYQ6 3014 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms