RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 LINC00477Q96M19 166 aa10.2□□□□□ -0.78
SREBF1-207ENST00000447641 ODF3Q96PU9 254 aa10.2□□□□□ -0.78
SREBF1-207ENST00000447641 OSTCQ9NRP0 149 aa10.2□□□□□ -0.78
SREBF1-207ENST00000447641 SMIM9A6NGZ8 99 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 BTN1A1Q13410 526 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 C9orf47Q6ZRZ4 202 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 AGPAT4-IT1Q9H0P7 198 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 PPP1R14DQ9NXH3 145 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 ZNF492Q9P255 531 aa10.19□□□□□ -0.78
SREBF1-207ENST00000447641 KIAA1109Q2LD37 5005 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 TRBV20OR9-2A0A075B6H5 130 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 TRAV34A0A0B4J273 112 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 IGHV4-28A0A0C4DH34 117 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 XKRY2A2RUG3 117 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 ZNF138P52744 262 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 RNF212Q495C1 297 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 IBA57Q5T440 356 aaKnown RBP10.18□□□□□ -0.78
SREBF1-207ENST00000447641 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
SREBF1-207ENST00000447641 TRAV9-1A0A075B6T8 112 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 TSPOP30536 169 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 CDKN1BP46527 198 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 ERCC8Q13216 396 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 SMUG1Q53HV7 270 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 ATRAIDQ6UW56 229 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 COX8CQ7Z4L0 72 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 LINC00479Q96M42 142 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 VGLL1Q99990 258 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 MLST8Q9BVC4 326 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
SREBF1-207ENST00000447641 TRAV12-2A0A075B6T6 113 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 IGKV2-40A0A087WW87 121 aaPredicted RBP10.16□□□□□ -0.78
SREBF1-207ENST00000447641 DEFB4AO15263 64 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 INSP01308 110 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 IGKV2D-40P01614 121 aaPredicted RBP10.16□□□□□ -0.78
SREBF1-207ENST00000447641 P01737 135 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 KIR3DS1Q14943 382 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 CT83Q5H943 113 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 FAM162BQ5T6X4 162 aa10.16□□□□□ -0.78
SREBF1-207ENST00000447641 ZNF705GA8MUZ8 300 aaPredicted RBP10.15□□□□□ -0.78
SREBF1-207ENST00000447641 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
SREBF1-207ENST00000447641 IGLV2-11P01706 119 aa10.15□□□□□ -0.78
SREBF1-207ENST00000447641 CRISP2P16562 243 aa10.15□□□□□ -0.78
SREBF1-207ENST00000447641 RPS20P60866 119 aaKnown RBP10.15□□□□□ -0.78
SREBF1-207ENST00000447641 TMEM256Q8N2U0 113 aa10.15□□□□□ -0.78
SREBF1-207ENST00000447641 C20orf144Q9BQM9 153 aa10.15□□□□□ -0.78
SREBF1-207ENST00000447641 TRAV8-1A0A0A6YYK1 113 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 A8MWL6 223 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 KLLNB2CW77 178 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 K7EN84 100 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 LEPP41159 167 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 Q6AWC8 147 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 TMEM88Q6PEY1 159 aa10.14□□□□□ -0.79
SREBF1-207ENST00000447641 VPS13DQ5THJ4 4388 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 TMEM189A5PLL7 270 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 FAM231BA6NCW3 169 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 SCO1O75880 301 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 IGLV2-8P01709 118 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 COX19Q49B96 90 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 GFI1BQ5VTD9 330 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 CBLN2Q8IUK8 224 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 GFRA4Q9GZZ7 299 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 RPP21Q9H633 154 aaKnown RBP10.13□□□□□ -0.79
SREBF1-207ENST00000447641 IL36BQ9NZH7 164 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 DNAH6Q9C0G6 4158 aa10.13□□□□□ -0.79
SREBF1-207ENST00000447641 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
SREBF1-207ENST00000447641 ZNF324O75467 553 aaPredicted RBP10.12□□□□□ -0.79
SREBF1-207ENST00000447641 OR5I1Q13606 314 aa10.12□□□□□ -0.79
SREBF1-207ENST00000447641 NHLRC2Q8NBF2 726 aa10.12□□□□□ -0.79
SREBF1-207ENST00000447641 C11orf45Q8TAV5 145 aa10.12□□□□□ -0.79
SREBF1-207ENST00000447641 SGK494Q96LW2 274 aa10.12□□□□□ -0.79
SREBF1-207ENST00000447641 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 PLAC8L1A1L4L8 177 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 PRM2P04554 102 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 RRN3P1Q2M238 152 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.11□□□□□ -0.79
SREBF1-207ENST00000447641 TSKUQ8WUA8 353 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 LINC01587Q99440 93 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 TMEM208Q9BTX3 173 aa10.11□□□□□ -0.79
SREBF1-207ENST00000447641 C7orf71A4D174 169 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 C19orf71A6NCJ1 209 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 PFN1P07737 140 aaKnown RBP10.1□□□□□ -0.79
SREBF1-207ENST00000447641 AZU1P20160 251 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 NANOS2P60321 138 aaKnown RBP10.1□□□□□ -0.79
SREBF1-207ENST00000447641 NUDT10Q8NFP7 164 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 NUDT11Q96G61 164 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
SREBF1-207ENST00000447641 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 V9GYV3 84 aa10.1□□□□□ -0.79
SREBF1-207ENST00000447641 TRAV12-3A0A0B4J271 114 aa10.09□□□□□ -0.79
SREBF1-207ENST00000447641 TRAV21A0A0B4J279 112 aa10.09□□□□□ -0.79
SREBF1-207ENST00000447641 S100A8P05109 93 aa10.09□□□□□ -0.79
SREBF1-207ENST00000447641 GPX1P07203 203 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms