RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TRGV11A0A075B6L2 103 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 A0A0J9YY99 117 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 PAGE4O60829 102 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 TYMSP04818 313 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 DPPA3Q6W0C5 159 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 Q86TA4 180 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 UBE2DNLQ8IWF7 75 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 POM121L12Q8N7R1 296 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 C15orf53Q8NAA6 179 aa10.38□□□□□ -0.75
HDAC4-204ENST00000446876 IGHV3-16A0A0C4DH30 117 aa10.37□□□□□ -0.75
HDAC4-204ENST00000446876 H2AFB1P0C5Y9 115 aa10.37□□□□□ -0.75
HDAC4-204ENST00000446876 TDRG1Q3Y452 100 aa10.37□□□□□ -0.75
HDAC4-204ENST00000446876 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
HDAC4-204ENST00000446876 C9orf62Q8N4C0 152 aa10.37□□□□□ -0.75
HDAC4-204ENST00000446876 HIST1H2BAQ96A08 127 aa10.37□□□□□ -0.75
HDAC4-204ENST00000446876 NKX6-2Q9C056 277 aaPredicted RBP10.37□□□□□ -0.75
HDAC4-204ENST00000446876 PPT1P50897 306 aa10.36□□□□□ -0.75
HDAC4-204ENST00000446876 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
HDAC4-204ENST00000446876 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
HDAC4-204ENST00000446876 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
HDAC4-204ENST00000446876 FBLL1A6NHQ2 334 aaKnown RBP10.35□□□□□ -0.75
HDAC4-204ENST00000446876 PFN1P07737 140 aaKnown RBP10.35□□□□□ -0.75
HDAC4-204ENST00000446876 CCL20P78556 96 aa10.35□□□□□ -0.75
HDAC4-204ENST00000446876 LGALS9BQ3B8N2 356 aa10.35□□□□□ -0.75
HDAC4-204ENST00000446876 SAPCD1Q5SSQ6 148 aa10.35□□□□□ -0.75
HDAC4-204ENST00000446876 C18orf15Q96N68 181 aa10.35□□□□□ -0.75
HDAC4-204ENST00000446876 SCO2A0A1W2PP80 73 aa10.34□□□□□ -0.75
HDAC4-204ENST00000446876 SFTA3P0C7M3 94 aa10.34□□□□□ -0.75
HDAC4-204ENST00000446876 AKR1C3P42330 323 aa10.34□□□□□ -0.75
HDAC4-204ENST00000446876 SLC51BQ86UW2 128 aa10.34□□□□□ -0.75
HDAC4-204ENST00000446876 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
HDAC4-204ENST00000446876 KCNS1Q96KK3 526 aa10.34□□□□□ -0.75
HDAC4-204ENST00000446876 IGLV2-18A0A075B6J9 118 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 M0R2N4 97 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 SULT1A2P50226 295 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 UBE2G1P62253 170 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 EIF5AL1Q6IS14 154 aaKnown RBP10.33□□□□□ -0.76
HDAC4-204ENST00000446876 FMC1Q96HJ9 113 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 VSIG2Q96IQ7 327 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 SPXQ9BT56 116 aa10.33□□□□□ -0.76
HDAC4-204ENST00000446876 RAB5CP51148 216 aa10.32□□□□□ -0.76
HDAC4-204ENST00000446876 NKX2-5P52952 324 aaPredicted RBP10.32□□□□□ -0.76
HDAC4-204ENST00000446876 RNF212Q495C1 297 aa10.32□□□□□ -0.76
HDAC4-204ENST00000446876 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
HDAC4-204ENST00000446876 RASL10AQ92737 203 aa10.32□□□□□ -0.76
HDAC4-204ENST00000446876 ZNF479Q96JC4 524 aa10.32□□□□□ -0.76
HDAC4-204ENST00000446876 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
HDAC4-204ENST00000446876 IGKV3D-20A0A0C4DH25 116 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 M0R2P5 195 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 LTAP01374 205 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 CRIP1P50238 77 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 FHL2Q14192 279 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 LINC00588Q9Y4M8 146 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 FRAS1Q86XX4 4008 aa10.31□□□□□ -0.76
HDAC4-204ENST00000446876 TRAV1-1A0A0B4J248 108 aa10.3□□□□□ -0.76
HDAC4-204ENST00000446876 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
HDAC4-204ENST00000446876 C9JCJ5 164 aa10.3□□□□□ -0.76
HDAC4-204ENST00000446876 SH2D1AO60880 128 aa10.3□□□□□ -0.76
HDAC4-204ENST00000446876 C9orf85Q96MD7 179 aa10.3□□□□□ -0.76
HDAC4-204ENST00000446876 ZFP30Q9Y2G7 519 aa10.3□□□□□ -0.76
HDAC4-204ENST00000446876 A0A096LPF7 62 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 TRGV4A0A0C4DH28 118 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 FABP5P3A8MUU1 101 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 H3BNG1 76 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 M0R036 132 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 PAX4O43316 350 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 RNASE3P12724 160 aaKnown RBP10.29□□□□□ -0.76
HDAC4-204ENST00000446876 MANBALQ9NQG1 85 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
HDAC4-204ENST00000446876 TRAV4A0A0B4J268 109 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 ORM1P02763 201 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 CRYBA4P53673 196 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 CCL18P55774 89 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 ALKAL2Q6UX46 152 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 COX8CQ7Z4L0 72 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 DERL1Q9BUN8 251 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 PRO0255Q9UI72 69 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 HHLA3Q9XRX5 114 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 BIRC6Q9NR09 4857 aa10.28□□□□□ -0.76
HDAC4-204ENST00000446876 TMSB15BA0A087X1C1 80 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 GRIFINA4D1Z8 144 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 PGPEP1LA6NFU8 196 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 B4DEV8 164 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 ESRGQ1W209 222 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 ZNF674Q2M3X9 581 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 FAM162BQ5T6X4 162 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 ZNRF2Q8NHG8 242 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 DNAH2Q9P225 4427 aa10.27□□□□□ -0.77
HDAC4-204ENST00000446876 KRBOX1C9JBD0 128 aa10.26□□□□□ -0.77
HDAC4-204ENST00000446876 TEX46H3BTG2 121 aa10.26□□□□□ -0.77
HDAC4-204ENST00000446876 H3BVH4 76 aa10.26□□□□□ -0.77
HDAC4-204ENST00000446876 S100A4P26447 101 aaKnown RBP10.26□□□□□ -0.77
HDAC4-204ENST00000446876 ASIPP42127 132 aa10.26□□□□□ -0.77
HDAC4-204ENST00000446876 ZNF506Q5JVG8 444 aa10.26□□□□□ -0.77
HDAC4-204ENST00000446876 Q6ZR54 194 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms