RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ADAMTSL5Q6ZMM2 481 aa13.1□□□□□ -0.31
SMC6-206ENST00000446852 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
SMC6-206ENST00000446852 SORL1Q92673 2214 aa13.09□□□□□ -0.31
SMC6-206ENST00000446852 AGRNO00468 2067 aa13.09□□□□□ -0.31
SMC6-206ENST00000446852 SMKR1H3BMG3 65 aa13.09□□□□□ -0.31
SMC6-206ENST00000446852 ORMDL3Q8N138 153 aa13.09□□□□□ -0.31
SMC6-206ENST00000446852 RNF185Q96GF1 192 aa13.09□□□□□ -0.31
SMC6-206ENST00000446852 PRELID3AQ96N28 172 aa13.09□□□□□ -0.31
SMC6-206ENST00000446852 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.31
SMC6-206ENST00000446852 K7EQG2 157 aa13.08□□□□□ -0.31
SMC6-206ENST00000446852 RNASE4P34096 147 aaKnown RBP13.08□□□□□ -0.31
SMC6-206ENST00000446852 TRBV7-9A0A0J9YWB2 115 aa13.08□□□□□ -0.32
SMC6-206ENST00000446852 PSMG4Q5JS54 123 aa13.08□□□□□ -0.32
SMC6-206ENST00000446852 DUX3Q96PT4 197 aa13.08□□□□□ -0.32
SMC6-206ENST00000446852 H3BVH4 76 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 NCR2O95944 276 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 OR5AL1P0C617 328 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 C4orf3Q8WVX3 66 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 SETD2Q9BYW2 2564 aaPredicted RBP13.07□□□□□ -0.32
SMC6-206ENST00000446852 KIR2DL5BA0A0G2JN68 375 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 KIR2DL5BA0A0G2JPC4 375 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 SNAI2O43623 268 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 RAB4AP20338 218 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 KHDC1LQ5JSQ8 128 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 LINC00173Q6ZV60 143 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 KIR2DL5AQ8N109 375 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 OR11H1Q8NG94 326 aa13.07□□□□□ -0.32
SMC6-206ENST00000446852 CKS2P33552 79 aa13.06□□□□□ -0.32
SMC6-206ENST00000446852 LINC01619G3V211 115 aa13.06□□□□□ -0.32
SMC6-206ENST00000446852 GAS8-AS1O95177 125 aa13.06□□□□□ -0.32
SMC6-206ENST00000446852 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
SMC6-206ENST00000446852 WFDC12Q8WWY7 111 aa13.06□□□□□ -0.32
SMC6-206ENST00000446852 AP5S1Q9NUS5 200 aa13.06□□□□□ -0.32
SMC6-206ENST00000446852 SIGLEC8Q9NYZ4 499 aa13.06□□□□□ -0.32
SMC6-206ENST00000446852 LOC389332A0A1B0GUA5 103 aa13.05□□□□□ -0.32
SMC6-206ENST00000446852 KLLNB2CW77 178 aa13.05□□□□□ -0.32
SMC6-206ENST00000446852 NPYP01303 97 aa13.05□□□□□ -0.32
SMC6-206ENST00000446852 ANXA2RQ3ZCQ2 193 aa13.05□□□□□ -0.32
SMC6-206ENST00000446852 PRSS3P2Q8NHM4 247 aa13.05□□□□□ -0.32
SMC6-206ENST00000446852 EVI2AP22794 236 aa13.05□□□□□ -0.32
SMC6-206ENST00000446852 SNRPD3P62318 126 aaKnown RBP13.05□□□□□ -0.32
SMC6-206ENST00000446852 BTF3P20290 206 aaKnown RBP13.04□□□□□ -0.32
SMC6-206ENST00000446852 SPATA12Q7Z6I5 190 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 KLHL30-AS1Q8NEE0 82 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 PAM16Q9Y3D7 125 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 IGHV4-4A0A075B6R2 117 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 A0A0J9YX75 114 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 LEPROTL1O95214 131 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 FA2HQ7L5A8 372 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 OR1N2Q8NGR9 330 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
SMC6-206ENST00000446852 TIMM8BQ9Y5J9 83 aaPredicted RBP13.04□□□□□ -0.32
SMC6-206ENST00000446852 SPRY2O43597 315 aa13.03□□□□□ -0.32
SMC6-206ENST00000446852 DEFA6Q01524 100 aa13.03□□□□□ -0.32
SMC6-206ENST00000446852 SPANXN1Q5VSR9 72 aa13.03□□□□□ -0.32
SMC6-206ENST00000446852 DPF1Q92782 380 aa13.03□□□□□ -0.32
SMC6-206ENST00000446852 C14orf144Q96I85 54 aa13.03□□□□□ -0.32
SMC6-206ENST00000446852 CTAG1AP78358 180 aa13.02□□□□□ -0.32
SMC6-206ENST00000446852 MUC4Q99102 2169 aa13.02□□□□□ -0.32
SMC6-206ENST00000446852 GNRH2O43555 120 aa13.02□□□□□ -0.33
SMC6-206ENST00000446852 CACNG7P62955 275 aa13.02□□□□□ -0.33
SMC6-206ENST00000446852 OR9G4Q8NGQ1 327 aa13.02□□□□□ -0.33
SMC6-206ENST00000446852 DLX4Q92988 240 aaPredicted RBP13.02□□□□□ -0.33
SMC6-206ENST00000446852 TMEM70Q9BUB7 260 aa13.02□□□□□ -0.33
SMC6-206ENST00000446852 OTOGQ6ZRI0 2925 aa13.02□□□□□ -0.33
SMC6-206ENST00000446852 A0A096LNJ9 63 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 ASIPP42127 132 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 ATOH7Q8N100 152 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 PPBPP02775 128 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 GATA1P15976 413 aaPredicted RBP13.01□□□□□ -0.33
SMC6-206ENST00000446852 C11orf44Q8N8P7 122 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 C20orf144Q9BQM9 153 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
SMC6-206ENST00000446852 TCF21O43680 179 aa13□□□□□ -0.33
SMC6-206ENST00000446852 S100A4P26447 101 aaKnown RBP13□□□□□ -0.33
SMC6-206ENST00000446852 CRXO43186 299 aaPredicted RBP13□□□□□ -0.33
SMC6-206ENST00000446852 RNASE3P12724 160 aaKnown RBP13□□□□□ -0.33
SMC6-206ENST00000446852 ODF3Q96PU9 254 aa13□□□□□ -0.33
SMC6-206ENST00000446852 SMR3AQ99954 134 aa13□□□□□ -0.33
SMC6-206ENST00000446852 NDUFAF3Q9BU61 184 aa13□□□□□ -0.33
SMC6-206ENST00000446852 SCRT2Q9NQ03 307 aa13□□□□□ -0.33
SMC6-206ENST00000446852 TRAV12-3A0A0B4J271 114 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 SYS1-DBNDD2H3BUS1 97 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 M0R381 172 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
SMC6-206ENST00000446852 PEMTQ9UBM1 199 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 NOTCH2Q04721 2471 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 TNFRSF6BO95407 300 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 SMIM15Q7Z3B0 74 aa12.99□□□□□ -0.33
SMC6-206ENST00000446852 TRAV26-2A0A0B4J265 109 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 MAJINQ3KP22 176 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 TMEM61Q8N0U2 210 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 TRAV12-2A0A075B6T6 113 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 C7orf71A4D174 169 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 MED14OSP0DP75 135 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 CD28P10747 220 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 LEPP41159 167 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 FXYD7P58549 80 aa12.98□□□□□ -0.33
SMC6-206ENST00000446852 RAX2Q96IS3 184 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms