RNA–Protein interactions for RNA: ENST00000446625.6

LIMCH1-204, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 5

Gene LIMCH1, Length 789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-204ENST00000446625 RHOHQ15669 191 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 VWC2Q2TAL6 325 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 MIC13Q5XKP0 118 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 FAM122CQ6P4D5 195 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 Q6ZNX1 250 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 Q6ZRG5 221 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 RMI2Q96E14 147 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 PRADC1Q9BSG0 188 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 MUC2Q02817 5179 aa4.98□□□□□ -1.61
LIMCH1-204ENST00000446625 IGHV3-73A0A0B4J1V6 119 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 TRBV7-9A0A0J9YWB2 115 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 A0A1B0GVG6 124 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 TRBV6-4A0A1B0GX49 114 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 CAMLGP49069 296 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 INPP1P49441 399 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 AP3S2P59780 193 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 PDE6HQ13956 83 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 FAM159AQ6UWV7 190 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 NRARPQ7Z6K4 114 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 DEDD2Q8WXF8 326 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 LINC01600Q96MT4 127 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 DPH3P1Q9H4G8 78 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 AAMDCQ9H7C9 122 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 GSKIPQ9P0R6 139 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 TMEM14CQ9P0S9 112 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 NAGKQ9UJ70 344 aa4.97□□□□□ -1.61
LIMCH1-204ENST00000446625 A0A0D9SG52 128 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 C9orf170A2RU37 121 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 C5orf51A6NDU8 294 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 NAP1L6A6NFF2 107 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 IAH1Q2TAA2 248 aaPredicted RBP4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 FFAR4Q5NUL3 377 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 CFAP126Q5VTH2 177 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 Q6AWC8 147 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 MZT2BQ6NZ67 158 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 C12orf45Q8N5I9 185 aaPredicted RBP4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 OR1L4Q8NGR5 311 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 PFDN5Q99471 154 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 GGACTQ9BVM4 153 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 KLK12Q9UKR0 248 aa4.96□□□□□ -1.62
LIMCH1-204ENST00000446625 FAM240BA0A1B0GVZ2 78 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 CENPXA8MT69 81 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 TSC22D2O75157 780 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 OR10J4P0C629 311 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 RAB31Q13636 194 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 C14orf177Q52M58 125 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 DPPA3Q6W0C5 159 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 HSD17B11Q8NBQ5 300 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 ENKURQ8TC29 256 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 UBE2WQ96B02 151 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 SLC25A21Q9BQT8 299 aaPredicted RBP4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 MARVELD1Q9BSK0 173 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 GPN1Q9HCN4 374 aaPredicted RBP4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 SLC39A9Q9NUM3 307 aa4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 LSM5Q9Y4Y9 91 aaKnown RBP4.95□□□□□ -1.62
LIMCH1-204ENST00000446625 UBE2L5PA0A1B0GUS4 154 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 GAGE12JA6NER3 117 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 FAM25EA8MYX2 175 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 CST7O76096 145 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 NDUFB6O95139 128 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 TCRBP04435 133 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 TYMSP04818 313 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 LINC00694P0DN24 101 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 BCAP31P51572 246 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 CAV2P51636 162 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 GAGE1Q13065 139 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 GAGE4Q13068 117 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 GAGE5Q13069 117 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 ZNF876PQ49A33 203 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 GAGE13Q4V321 117 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 ATRAIDQ6UW56 229 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 NIT1Q86X76 327 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 C9orf163Q8N9P6 203 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 C2orf50Q96LR7 162 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 SH3BGRL3Q9H299 93 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 OR51M1Q9H341 326 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 Q9UF83 564 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 URGCP-MRPS24S4R325 110 aa4.94□□□□□ -1.62
LIMCH1-204ENST00000446625 A0A0J9YXV3 536 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 C7orf66A4D0T2 115 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 USP17L23D6RBM5 183 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 L7N2F9 121 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 CIDEAO60543 219 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 MBPP02686 304 aaPredicted RBP4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 PRSS1P07477 247 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 NBEAP1P0C6P0 100 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 RPL29P47914 159 aaKnown RBP4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 TAS2R30P59541 319 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 S100A10P60903 97 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 VAMP2P63027 116 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 GCSAMLQ5JQS6 135 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 SDIM1Q6ZPB5 146 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 FAM167A-AS1Q96KT0 104 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 SLC25A2Q9BXI2 301 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 C20orf85Q9H1P6 137 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 NUDT15Q9NV35 164 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 WDR83OSQ9Y284 106 aa4.93□□□□□ -1.62
LIMCH1-204ENST00000446625 hCG_2014768A0A024R1R8 64 aa4.92□□□□□ -1.62
LIMCH1-204ENST00000446625 TRAV6A0A075B6T7 132 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms