RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 RBM12B-AS1Q9P1G2 102 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 AMMECR1Q9Y4X0 333 aaPredicted RBP4.48□□□□□ -1.69
MCF2-206ENST00000446225 PXMP4Q9Y6I8 212 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 TRAV5A0A0B4J249 113 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 MEIS3P1A6NDR6 274 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 A6NDX4 124 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 DNASE2O00115 360 aaPredicted RBP4.48□□□□□ -1.69
MCF2-206ENST00000446225 BRS3P32247 399 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 ATP5G3P48201 142 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 DYNLT3P51808 116 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 FAM222AQ5U5X8 452 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 FAAP20Q6NZ36 180 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 Q6ZS49 121 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 DRAM1Q8N682 238 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 KLHL30-AS1Q8NEE0 82 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 KCNS1Q96KK3 526 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 KCNIP2Q9NS61 270 aa4.48□□□□□ -1.69
MCF2-206ENST00000446225 IGKV2D-30A0A075B6S6 120 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 TRBV6-7A0A0A0MS04 114 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 IGHV3-72A0A0B4J1Y9 119 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 OOSP1A8MZH6 123 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 ZNF736B4DX44 427 aaPredicted RBP4.47□□□□□ -1.69
MCF2-206ENST00000446225 OVOL1O14753 267 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 IL3RAP26951 378 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 SLC38A11Q08AI6 406 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 FABP9Q0Z7S8 132 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 ORMDL2Q53FV1 153 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 RTN4IP1Q8WWV3 396 aaPredicted RBP4.47□□□□□ -1.69
MCF2-206ENST00000446225 ABHD14BQ96IU4 210 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 NAT8Q9UHE5 227 aa4.47□□□□□ -1.69
MCF2-206ENST00000446225 IGHV1-3A0A0C4DH29 117 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 J3QRK9 145 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 BCL2L11O43521 198 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 BCL2P10415 239 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 NFYAP23511 347 aaPredicted RBP4.46□□□□□ -1.69
MCF2-206ENST00000446225 ZNF137PP52743 207 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 ZNF816Q0VGE8 651 aaPredicted RBP4.46□□□□□ -1.69
MCF2-206ENST00000446225 RPL39P5Q59GN2 51 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 ZNF695Q8IW36 515 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 FRZBQ92765 325 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 LINC00479Q96M42 142 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 TIMM17AQ99595 171 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 GINS4Q9BRT9 223 aa4.46□□□□□ -1.69
MCF2-206ENST00000446225 MRPL20Q9BYC9 149 aaKnown RBP4.46□□□□□ -1.69
MCF2-206ENST00000446225 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 TRAV4A0A0B4J268 109 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 M0R1X1 148 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 IFNA7P01567 189 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 PMP2P02689 132 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 HSPB1P04792 205 aaKnown RBP4.46□□□□□ -1.7
MCF2-206ENST00000446225 GPX1P07203 203 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 SAA2P0DJI9 122 aaPredicted RBP4.46□□□□□ -1.7
MCF2-206ENST00000446225 ATP6V0CP27449 155 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 LPAR6P43657 344 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 DEFA3P59666 94 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 BLCAPP62952 87 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 TMEM241Q24JQ0 296 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 ZNF833PQ6ZTB9 187 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 ATP5L2Q7Z4Y8 100 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 NPBQ8NG41 125 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 GTSF1LQ9H1H1 148 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 ANAPC10Q9UM13 185 aa4.46□□□□□ -1.7
MCF2-206ENST00000446225 TRBV19A0A075B6N1 114 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 NDUFAF8A1L188 74 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 H7C423 109 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 IGKV1D-33P01593 117 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 IGKV1-33P01594 117 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 LINC00694P0DN24 101 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 MDKP21741 143 aaPredicted RBP4.45□□□□□ -1.7
MCF2-206ENST00000446225 EBI3Q14213 229 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 HES1Q14469 280 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 GTF2H5Q6ZYL4 71 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.45□□□□□ -1.7
MCF2-206ENST00000446225 FXYD5Q96DB9 178 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 CARD19Q96LW7 228 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 NABP2Q9BQ15 211 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 SOSTQ9BQB4 213 aa4.45□□□□□ -1.7
MCF2-206ENST00000446225 EIF5A2Q9GZV4 153 aaKnown RBP4.45□□□□□ -1.7
MCF2-206ENST00000446225 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 DPM2O94777 84 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 AKAIN1P0CW23 69 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 PYY3Q5JQD4 70 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 Q5XG85 94 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 Q8N6K4 173 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 C20orf203Q8NBC4 194 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 OR2T10Q8NGZ9 312 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 LINC01006Q8NI28 216 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 IGF2BP2-AS1Q96M15 143 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 C16orf95Q9H693 158 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 TENM1Q9UKZ4 2725 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 STAB1Q9NY15 2570 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 DNHD1Q96M86 4753 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 TRAV8-1A0A0A6YYK1 113 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 IGHV3-74A0A0B4J1X5 117 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 CLPSL1A2RUU4 121 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 KLLNB2CW77 178 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 H7BYZ3 331 aa4.44□□□□□ -1.7
MCF2-206ENST00000446225 S100A2P29034 98 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms