RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 TMEM190Q8WZ59 177 aa10.73□□□□□ -0.69
VPS52-212ENST00000445902 RNASE6Q93091 150 aaKnown RBP10.73□□□□□ -0.69
VPS52-212ENST00000445902 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
VPS52-212ENST00000445902 IGFL2Q6UWQ7 119 aa10.73□□□□□ -0.69
VPS52-212ENST00000445902 PPDPFLQ8WWR9 84 aa10.72□□□□□ -0.69
VPS52-212ENST00000445902 IGHV7-4-1A0A0J9YVY3 117 aa10.72□□□□□ -0.69
VPS52-212ENST00000445902 RPL39LQ96EH5 51 aaKnown RBP10.72□□□□□ -0.69
VPS52-212ENST00000445902 SMIM2Q9BVW6 85 aa10.72□□□□□ -0.69
VPS52-212ENST00000445902 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
VPS52-212ENST00000445902 B5MCH6 92 aa10.71□□□□□ -0.69
VPS52-212ENST00000445902 CTSGP08311 255 aa10.71□□□□□ -0.69
VPS52-212ENST00000445902 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
VPS52-212ENST00000445902 KAAG1Q9UBP8 84 aa10.71□□□□□ -0.69
VPS52-212ENST00000445902 ACACAQ13085 2346 aa10.71□□□□□ -0.69
VPS52-212ENST00000445902 ASH1LQ9NR48 2969 aaKnown RBP10.71□□□□□ -0.69
VPS52-212ENST00000445902 A6NJY4 79 aa10.71□□□□□ -0.69
VPS52-212ENST00000445902 M0R381 172 aa10.71□□□□□ -0.7
VPS52-212ENST00000445902 ANKRD29Q8N6D5 301 aa10.71□□□□□ -0.7
VPS52-212ENST00000445902 NEXN-AS1Q8NBZ9 246 aa10.71□□□□□ -0.7
VPS52-212ENST00000445902 RASL10AQ92737 203 aa10.71□□□□□ -0.7
VPS52-212ENST00000445902 HIF1ANQ9NWT6 349 aa10.71□□□□□ -0.7
VPS52-212ENST00000445902 PRTN3P24158 256 aa10.7□□□□□ -0.7
VPS52-212ENST00000445902 UBE2D1P51668 147 aa10.7□□□□□ -0.7
VPS52-212ENST00000445902 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
VPS52-212ENST00000445902 TRAV12-1A0A0B4J245 112 aa10.7□□□□□ -0.7
VPS52-212ENST00000445902 SCGB1C2P0DMR2 95 aa10.7□□□□□ -0.7
VPS52-212ENST00000445902 BAALCQ8WXS3 180 aa10.7□□□□□ -0.7
VPS52-212ENST00000445902 UBE2D3P61077 147 aa10.69□□□□□ -0.7
VPS52-212ENST00000445902 UBE2D2P62837 147 aa10.69□□□□□ -0.7
VPS52-212ENST00000445902 SPTBN1Q01082 2364 aaKnown RBP10.69□□□□□ -0.7
VPS52-212ENST00000445902 A8MWV9 139 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 LINC01619G3V211 115 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 LY6LH3BQJ8 138 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 ZNF688P0C7X2 276 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 ZNF672Q499Z4 452 aaPredicted RBP10.68□□□□□ -0.7
VPS52-212ENST00000445902 C2orf66Q6UXQ4 117 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 Q6ZS46 218 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 NDUFA11Q86Y39 141 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 MGPP08493 103 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 CD7P09564 240 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 C5orf64Q2M2E5 130 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 ZFAND6Q6FIF0 208 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 BDP1A6H8Y1 2624 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 H7C2G1 150 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 IGF1P05019 195 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 TEX29Q8N6K0 151 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 TOMM6Q96B49 74 aa10.68□□□□□ -0.7
VPS52-212ENST00000445902 ANKRD11Q6UB99 2663 aaPredicted RBP10.67□□□□□ -0.7
VPS52-212ENST00000445902 TRBV20-1A0A075B6N2 111 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 SUMO2P61956 95 aaKnown RBP10.67□□□□□ -0.7
VPS52-212ENST00000445902 C14orf178Q8N769 122 aaPredicted RBP10.67□□□□□ -0.7
VPS52-212ENST00000445902 RAX2Q96IS3 184 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 COLQQ9Y215 455 aaPredicted RBP10.67□□□□□ -0.7
VPS52-212ENST00000445902 A0A0G2JNJ9 132 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 E7EQL1 145 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 Q6ZS92 163 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 OR11H6Q8NGC7 330 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 Q9UFV3 132 aa10.67□□□□□ -0.7
VPS52-212ENST00000445902 LY6HO94772 140 aa10.66□□□□□ -0.7
VPS52-212ENST00000445902 ORMDL2Q53FV1 153 aa10.66□□□□□ -0.7
VPS52-212ENST00000445902 PRR9Q5T870 116 aa10.66□□□□□ -0.7
VPS52-212ENST00000445902 COX6B1P14854 86 aa10.66□□□□□ -0.7
VPS52-212ENST00000445902 CRIP2P52943 208 aaPredicted RBP10.66□□□□□ -0.7
VPS52-212ENST00000445902 RNF5Q99942 180 aa10.66□□□□□ -0.7
VPS52-212ENST00000445902 DUSP14O95147 198 aaKnown RBP10.65□□□□□ -0.7
VPS52-212ENST00000445902 CFC1BP0CG36 223 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 CFC1P0CG37 223 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 TRPT1Q86TN4 253 aaKnown RBP10.65□□□□□ -0.7
VPS52-212ENST00000445902 AJUBAQ96IF1 538 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 SPTBN2O15020 2390 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 C11orf86A6NJI1 115 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 GAGE5Q13069 117 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 GAGE6Q13070 117 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 DPM3Q9P2X0 92 aa10.65□□□□□ -0.7
VPS52-212ENST00000445902 TRAV8-2A0A0B4J237 113 aa10.65□□□□□ -0.71
VPS52-212ENST00000445902 C9JAW5 83 aa10.65□□□□□ -0.71
VPS52-212ENST00000445902 A0A0J9YY99 117 aa10.64□□□□□ -0.71
VPS52-212ENST00000445902 BUB3O43684 328 aa10.64□□□□□ -0.71
VPS52-212ENST00000445902 CLEC3BP05452 202 aa10.64□□□□□ -0.71
VPS52-212ENST00000445902 DEFB1P60022 68 aa10.64□□□□□ -0.71
VPS52-212ENST00000445902 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
VPS52-212ENST00000445902 NHLRC4P0CG21 123 aaPredicted RBP10.64□□□□□ -0.71
VPS52-212ENST00000445902 TSPEAR-AS2P59090 65 aa10.64□□□□□ -0.71
VPS52-212ENST00000445902 CRLF1O75462 422 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 ARL3P36405 182 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 C15orf32Q32M92 178 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 LYRM7Q5U5X0 104 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 AKAP13Q12802 2813 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 NPBQ8NG41 125 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 PRO3102Q9H379 93 aa10.63□□□□□ -0.71
VPS52-212ENST00000445902 TRAV4A0A0B4J268 109 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 CRYGDP07320 174 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 S100A4P26447 101 aaKnown RBP10.62□□□□□ -0.71
VPS52-212ENST00000445902 ZFHX3Q15911 3703 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 SLC25A20O43772 301 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 TMEM170BQ5T4T1 132 aa10.62□□□□□ -0.71
VPS52-212ENST00000445902 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms