RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 X6R8D5 127 aa12.6□□□□□ -0.39
SGCE-206ENST00000445866 GNRH2O43555 120 aa12.59□□□□□ -0.39
SGCE-206ENST00000445866 P01737 135 aa12.59□□□□□ -0.39
SGCE-206ENST00000445866 ADCYAP1P18509 176 aa12.59□□□□□ -0.39
SGCE-206ENST00000445866 ERVFC1-1P60608 527 aa12.59□□□□□ -0.39
SGCE-206ENST00000445866 TP53TG3Q9ULZ0 132 aa12.59□□□□□ -0.39
SGCE-206ENST00000445866 TMSB15BA0A087X1C1 80 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 IGKV3D-20A0A0C4DH25 116 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 C19orf71A6NCJ1 209 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 SMIM9A6NGZ8 99 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 B4DEV8 164 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 NHLRC4P0CG21 123 aaPredicted RBP12.58□□□□□ -0.4
SGCE-206ENST00000445866 NEU1Q99519 415 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 LINC00467Q9BRT7 94 aa12.58□□□□□ -0.4
SGCE-206ENST00000445866 TMEM189A5PLL7 270 aa12.57□□□□□ -0.4
SGCE-206ENST00000445866 KRBOX1C9JBD0 128 aa12.57□□□□□ -0.4
SGCE-206ENST00000445866 TDRG1Q3Y452 100 aa12.57□□□□□ -0.4
SGCE-206ENST00000445866 IBA57Q5T440 356 aaKnown RBP12.57□□□□□ -0.4
SGCE-206ENST00000445866 OR2D3Q8NGH3 330 aa12.57□□□□□ -0.4
SGCE-206ENST00000445866 ISOC2Q96AB3 205 aa12.57□□□□□ -0.4
SGCE-206ENST00000445866 GRIFINA4D1Z8 144 aa12.56□□□□□ -0.4
SGCE-206ENST00000445866 MIFP14174 115 aa12.56□□□□□ -0.4
SGCE-206ENST00000445866 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
SGCE-206ENST00000445866 PNRC1Q12796 327 aaPredicted RBP12.56□□□□□ -0.4
SGCE-206ENST00000445866 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
SGCE-206ENST00000445866 C10orf91Q5T1B1 145 aa12.56□□□□□ -0.4
SGCE-206ENST00000445866 SFRP2Q96HF1 295 aa12.56□□□□□ -0.4
SGCE-206ENST00000445866 FBN3Q75N90 2809 aa12.55□□□□□ -0.4
SGCE-206ENST00000445866 GATCO43716 136 aaKnown RBP12.55□□□□□ -0.4
SGCE-206ENST00000445866 EMP1P54849 157 aa12.55□□□□□ -0.4
SGCE-206ENST00000445866 FAM231DQ6ZW35 169 aa12.55□□□□□ -0.4
SGCE-206ENST00000445866 C15orf54Q8N8G6 183 aa12.55□□□□□ -0.4
SGCE-206ENST00000445866 OSTCQ9NRP0 149 aa12.55□□□□□ -0.4
SGCE-206ENST00000445866 MDFICQ9P1T7 246 aa12.55□□□□□ -0.4
SGCE-206ENST00000445866 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 IGHV4-28A0A0C4DH34 117 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 DEFB4AO15263 64 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 TYMSP04818 313 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 APOC3P02656 99 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
SGCE-206ENST00000445866 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 OR10G8Q8NGN5 311 aa12.54□□□□□ -0.4
SGCE-206ENST00000445866 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
SGCE-206ENST00000445866 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
SGCE-206ENST00000445866 CARHSP1Q9Y2V2 147 aaKnown RBP12.54□□□□□ -0.4
SGCE-206ENST00000445866 IGHV3-16A0A0C4DH30 117 aa12.53□□□□□ -0.4
SGCE-206ENST00000445866 XKRY2A2RUG3 117 aa12.53□□□□□ -0.4
SGCE-206ENST00000445866 Q8NAQ8 132 aa12.53□□□□□ -0.4
SGCE-206ENST00000445866 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
SGCE-206ENST00000445866 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
SGCE-206ENST00000445866 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
SGCE-206ENST00000445866 GZMBP10144 247 aa12.52□□□□□ -0.4
SGCE-206ENST00000445866 ASIPP42127 132 aa12.52□□□□□ -0.4
SGCE-206ENST00000445866 RPS20P60866 119 aaKnown RBP12.52□□□□□ -0.4
SGCE-206ENST00000445866 MT-ND4LP03901 98 aa12.51□□□□□ -0.41
SGCE-206ENST00000445866 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
SGCE-206ENST00000445866 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
SGCE-206ENST00000445866 SNURFLB1AK76 121 aa12.51□□□□□ -0.41
SGCE-206ENST00000445866 ZNF415Q09FC8 603 aa12.51□□□□□ -0.41
SGCE-206ENST00000445866 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
SGCE-206ENST00000445866 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
SGCE-206ENST00000445866 A8MWL6 223 aa12.5□□□□□ -0.41
SGCE-206ENST00000445866 ARMS2P0C7Q2 107 aa12.5□□□□□ -0.41
SGCE-206ENST00000445866 S100A1P23297 94 aa12.5□□□□□ -0.41
SGCE-206ENST00000445866 RNF212Q495C1 297 aa12.5□□□□□ -0.41
SGCE-206ENST00000445866 V9GYV3 84 aa12.5□□□□□ -0.41
SGCE-206ENST00000445866 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
SGCE-206ENST00000445866 A0A0J9YWU9 116 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 PLAC8L1A1L4L8 177 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 H3BVH4 76 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 PPP1R2P9O14990 202 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 CXCL1P09341 107 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 RNASE3P12724 160 aaKnown RBP12.48□□□□□ -0.41
SGCE-206ENST00000445866 TCL1AP56279 114 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 DNLZQ5SXM8 178 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 SVBPQ8N300 66 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 CLRN3Q8NCR9 226 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 SPXQ9BT56 116 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
SGCE-206ENST00000445866 CT83Q5H943 113 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 ANAPC16Q96DE5 110 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 IL36BQ9NZH7 164 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 U3KQK5 164 aa12.48□□□□□ -0.41
SGCE-206ENST00000445866 HUWE1Q7Z6Z7 4374 aaKnown RBP12.47□□□□□ -0.41
SGCE-206ENST00000445866 SSTP61278 116 aa12.47□□□□□ -0.41
SGCE-206ENST00000445866 TSKUQ8WUA8 353 aa12.47□□□□□ -0.41
SGCE-206ENST00000445866 A0A1W2PPQ1 181 aa12.46□□□□□ -0.41
SGCE-206ENST00000445866 C7orf77A4D0Y5 90 aa12.46□□□□□ -0.41
SGCE-206ENST00000445866 SNAPINO95295 136 aa12.46□□□□□ -0.41
SGCE-206ENST00000445866 FER1L6-AS1Q8NA97 138 aa12.46□□□□□ -0.41
SGCE-206ENST00000445866 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
SGCE-206ENST00000445866 C11orf68Q9H3H3 251 aaKnown RBP12.46□□□□□ -0.41
SGCE-206ENST00000445866 PHLDA3Q9Y5J5 127 aa12.46□□□□□ -0.41
SGCE-206ENST00000445866 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 SPART-AS1P0CW21 52 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
SGCE-206ENST00000445866 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms