RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SFTA3P0C7M3 94 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 FHITP49789 147 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 FHL2Q14192 279 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 ZNF345Q14585 488 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 MAP1LC3BQ9GZQ8 125 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 C11orf21Q9P2W6 132 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 DNAH17Q9UFH2 4485 aa10.22□□□□□ -0.77
USE1-202ENST00000445667 FAT2Q9NYQ8 4349 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 NBDYA0A0U1RRE5 68 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 FAM74A7A6NL05 159 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 SMUG1Q53HV7 270 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 C1orf134Q5TEV5 83 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 RASL10AQ92737 203 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 ZNF479Q96JC4 524 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 KCNS1Q96KK3 526 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 Q9H8V8 135 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 SDF2L1Q9HCN8 221 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 PRO0255Q9UI72 69 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 HHLA3Q9XRX5 114 aa10.21□□□□□ -0.77
USE1-202ENST00000445667 TRGV4A0A0C4DH28 118 aa10.2□□□□□ -0.78
USE1-202ENST00000445667 A0A0D9SG52 128 aa10.2□□□□□ -0.78
USE1-202ENST00000445667 CRYBA4P53673 196 aa10.2□□□□□ -0.78
USE1-202ENST00000445667 ZNF471Q9BX82 626 aaPredicted RBP10.2□□□□□ -0.78
USE1-202ENST00000445667 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 KANTRA0A1W2PQU2 76 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 M0R2P5 195 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 PEX7O00628 323 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 BCL2L11O43521 198 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 PFN1P07737 140 aaKnown RBP10.19□□□□□ -0.78
USE1-202ENST00000445667 ZFP69Q49AA0 526 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 SAPCD1Q5SSQ6 148 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 MUC4Q99102 2169 aa10.19□□□□□ -0.78
USE1-202ENST00000445667 FBLL1A6NHQ2 334 aaKnown RBP10.18□□□□□ -0.78
USE1-202ENST00000445667 SEC11BP0C7V7 166 aa10.18□□□□□ -0.78
USE1-202ENST00000445667 SLAQ13239 276 aa10.18□□□□□ -0.78
USE1-202ENST00000445667 SOHLH1Q5JUK2 328 aa10.18□□□□□ -0.78
USE1-202ENST00000445667 TMUB2Q71RG4 321 aa10.18□□□□□ -0.78
USE1-202ENST00000445667 STOML3Q8TAV4 291 aa10.18□□□□□ -0.78
USE1-202ENST00000445667 NKX6-2Q9C056 277 aaPredicted RBP10.18□□□□□ -0.78
USE1-202ENST00000445667 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
USE1-202ENST00000445667 ICOSQ9Y6W8 199 aa10.18□□□□□ -0.78
USE1-202ENST00000445667 TRAV4A0A0B4J268 109 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 A0A1B0GV50 99 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 C9JCJ5 164 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 PPT1P50897 306 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 OR4C5Q8NGB2 326 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 FAM213BQ8TBF2 198 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 SFT2D1Q8WV19 159 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 HIST1H2BAQ96A08 127 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 UPK3BQ9BT76 320 aa10.17□□□□□ -0.78
USE1-202ENST00000445667 PFDN1O60925 122 aa10.16□□□□□ -0.78
USE1-202ENST00000445667 Q86TA4 180 aa10.16□□□□□ -0.78
USE1-202ENST00000445667 MBD3L1Q8WWY6 194 aa10.16□□□□□ -0.78
USE1-202ENST00000445667 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
USE1-202ENST00000445667 PAGE4O60829 102 aa10.15□□□□□ -0.78
USE1-202ENST00000445667 MRPL23Q16540 153 aaKnown RBP10.15□□□□□ -0.78
USE1-202ENST00000445667 ZNF876PQ49A33 203 aa10.15□□□□□ -0.78
USE1-202ENST00000445667 C6orf223Q8N319 242 aa10.15□□□□□ -0.78
USE1-202ENST00000445667 KRTAP1-5Q9BYS1 174 aa10.15□□□□□ -0.78
USE1-202ENST00000445667 HECTD4Q9Y4D8 3996 aa10.15□□□□□ -0.78
USE1-202ENST00000445667 IGKV3D-20A0A0C4DH25 116 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 FABP5P3A8MUU1 101 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 K7EQD1 137 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
USE1-202ENST00000445667 GYPEP15421 78 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 CRIP1P50238 77 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 LYPD5Q6UWN5 251 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 DPPA3Q6W0C5 159 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 C9orf85Q96MD7 179 aa10.14□□□□□ -0.79
USE1-202ENST00000445667 LOC100131303A0A0U1RQF7 123 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 PGPEP1LA6NFU8 196 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 UBE2G1P62253 170 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 EIF5AP63241 154 aaKnown RBP10.13□□□□□ -0.79
USE1-202ENST00000445667 TNP2Q05952 138 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 LGALSLQ3ZCW2 172 aaPredicted RBP10.13□□□□□ -0.79
USE1-202ENST00000445667 NEGR1Q7Z3B1 354 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 ZC2HC1AQ96GY0 325 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 PKD1P98161 4303 aa10.13□□□□□ -0.79
USE1-202ENST00000445667 SIVA1O15304 175 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 NXPH4O95158 308 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 ORM1P02763 201 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 H2AFB1P0C5Y9 115 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 TPT1P13693 172 aaKnown RBP10.12□□□□□ -0.79
USE1-202ENST00000445667 SRIP30626 198 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 TTC32Q5I0X7 151 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 ZNF506Q5JVG8 444 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 CFAP126Q5VTH2 177 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 Q6ZNX1 250 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
USE1-202ENST00000445667 FMC1Q96HJ9 113 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 ZFP30Q9Y2G7 519 aa10.12□□□□□ -0.79
USE1-202ENST00000445667 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
USE1-202ENST00000445667 M0R036 132 aa10.11□□□□□ -0.79
USE1-202ENST00000445667 RS1O15537 224 aa10.11□□□□□ -0.79
USE1-202ENST00000445667 SH2D1AO60880 128 aa10.11□□□□□ -0.79
USE1-202ENST00000445667 GATA1P15976 413 aaPredicted RBP10.11□□□□□ -0.79
USE1-202ENST00000445667 S100A4P26447 101 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms