RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 LINC01620Q4KN68 170 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 KLK9Q9UKQ9 250 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 PTPRQQ9UMZ3 2332 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 ATP6V0E1O15342 81 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 RHOHQ15669 191 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 TEX36Q5VZQ5 186 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 ZNF524Q96C55 264 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 TMEM243Q9BU79 118 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 TANC1Q9C0D5 1861 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 A0A0B4J2C4 111 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 Q6ZR03 302 aa14.72□□□□□ -0.05
SHANK3-203ENST00000445220 PRSS47A8MTI9 375 aa14.71□□□□□ -0.05
SHANK3-203ENST00000445220 A0A1B0GX51 115 aa14.7□□□□□ -0.06
SHANK3-203ENST00000445220 ZNF491Q8N8L2 437 aa14.7□□□□□ -0.06
SHANK3-203ENST00000445220 TPSG1Q9NRR2 321 aa14.7□□□□□ -0.06
SHANK3-203ENST00000445220 BRD3OSQ6XYD6 125 aa14.7□□□□□ -0.06
SHANK3-203ENST00000445220 IGF2BP2-AS1Q96M15 143 aa14.7□□□□□ -0.06
SHANK3-203ENST00000445220 ANAPC1Q9H1A4 1944 aa14.7□□□□□ -0.06
SHANK3-203ENST00000445220 IGHV3-16A0A0C4DH30 117 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 NXPH4O95158 308 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 SAA4P35542 130 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 FER1L5A0AVI2 2057 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 IGLV1-44P01699 117 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 ORMDL1Q9P0S3 153 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 PKDREJQ9NTG1 2253 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 A4D1N5 150 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 GATA3P23771 443 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 ZNRF2Q8NHG8 242 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 BPESC1Q9GZL8 116 aa14.69□□□□□ -0.06
SHANK3-203ENST00000445220 C11orf44Q8N8P7 122 aa14.68□□□□□ -0.06
SHANK3-203ENST00000445220 FAM208BQ5VWN6 2430 aa14.68□□□□□ -0.06
SHANK3-203ENST00000445220 UBE2E1P51965 193 aa14.68□□□□□ -0.06
SHANK3-203ENST00000445220 TRAV25A0A0B4J276 109 aa14.68□□□□□ -0.06
SHANK3-203ENST00000445220 RPL35AP18077 110 aaKnown RBP14.68□□□□□ -0.06
SHANK3-203ENST00000445220 C17orf77Q96MU5 243 aa14.68□□□□□ -0.06
SHANK3-203ENST00000445220 DOCK8Q8NF50 2099 aa14.68□□□□□ -0.06
SHANK3-203ENST00000445220 ZNF407Q9C0G0 2248 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 IGHV3-38A0A0C4DH36 116 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 GATA1P15976 413 aaPredicted RBP14.67□□□□□ -0.06
SHANK3-203ENST00000445220 HEATR5AQ86XA9 2040 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 SP5Q6BEB4 398 aaPredicted RBP14.67□□□□□ -0.06
SHANK3-203ENST00000445220 ICOSQ9Y6W8 199 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 CADP27708 2225 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 NDUFA4O00483 81 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 LINC01356Q8N9X3 169 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 CFHR4Q92496 578 aa14.67□□□□□ -0.06
SHANK3-203ENST00000445220 ARFGEF3Q5TH69 2177 aa14.66□□□□□ -0.06
SHANK3-203ENST00000445220 IGLV3-9A0A075B6K5 115 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 DUX4L9Q6RFH8 374 aaPredicted RBP14.65□□□□□ -0.06
SHANK3-203ENST00000445220 MUSTN1Q8IVN3 82 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 RNF166Q96A37 237 aaPredicted RBP14.65□□□□□ -0.06
SHANK3-203ENST00000445220 RBAKDNA6NC62 111 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 DYNAPQ8N1N2 210 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 TTTY13Q9BZ97 58 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 Q9H8V8 135 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 LOXP28300 417 aaPredicted RBP14.65□□□□□ -0.06
SHANK3-203ENST00000445220 LENEPQ9Y5L5 61 aa14.65□□□□□ -0.06
SHANK3-203ENST00000445220 DEFB130BP0DP73 79 aa14.64□□□□□ -0.07
SHANK3-203ENST00000445220 DEFB130AP0DP74 79 aa14.64□□□□□ -0.07
SHANK3-203ENST00000445220 CHD3Q12873 2000 aaKnown RBP14.64□□□□□ -0.07
SHANK3-203ENST00000445220 AGPAT4-IT1Q9H0P7 198 aa14.64□□□□□ -0.07
SHANK3-203ENST00000445220 F6UB75 175 aa14.64□□□□□ -0.07
SHANK3-203ENST00000445220 G3V318 75 aa14.64□□□□□ -0.07
SHANK3-203ENST00000445220 PRB1P04280 392 aa14.64□□□□□ -0.07
SHANK3-203ENST00000445220 RNASE13Q5GAN3 156 aaKnown RBP14.63□□□□□ -0.07
SHANK3-203ENST00000445220 MRPL53Q96EL3 112 aaKnown RBP14.63□□□□□ -0.07
SHANK3-203ENST00000445220 LY6HO94772 140 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 HERV-K104P63124 156 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 ZNF503-AS2A6NEH8 195 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 XCL2Q9UBD3 114 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 TRAV12-2A0A075B6T6 113 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 TRBV10-2A0A0K0K1G8 114 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 ZNF561-AS1K7EIQ3 104 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 PIP4P1Q86T03 277 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 KLHL30-AS1Q8NEE0 82 aa14.63□□□□□ -0.07
SHANK3-203ENST00000445220 GP9P14770 177 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 LYPD6Q86Y78 171 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 TECTAO75443 2155 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 H3BT86 120 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 H0YGX0 51 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 RNF183Q96D59 192 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 GTSF1Q8WW33 167 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 IGKV3D-7A0A0C4DH55 119 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 CRYGCP07315 174 aa14.62□□□□□ -0.07
SHANK3-203ENST00000445220 MSMBP08118 114 aa14.61□□□□□ -0.07
SHANK3-203ENST00000445220 SPATA12Q7Z6I5 190 aa14.61□□□□□ -0.07
SHANK3-203ENST00000445220 FRMPD3Q5JV73 1810 aa14.61□□□□□ -0.07
SHANK3-203ENST00000445220 IGHG2P01859 326 aa14.61□□□□□ -0.07
SHANK3-203ENST00000445220 PRR30Q53SZ7 412 aaPredicted RBP14.61□□□□□ -0.07
SHANK3-203ENST00000445220 NSUN5P1Q3KNT7 163 aa14.61□□□□□ -0.07
SHANK3-203ENST00000445220 C2orf70A6NJV1 201 aa14.6□□□□□ -0.07
SHANK3-203ENST00000445220 HOXD3P31249 432 aaPredicted RBP14.6□□□□□ -0.07
SHANK3-203ENST00000445220 FOXE3Q13461 319 aa14.6□□□□□ -0.07
SHANK3-203ENST00000445220 MRPL23Q16540 153 aaKnown RBP14.6□□□□□ -0.07
SHANK3-203ENST00000445220 C3orf56Q8N813 242 aa14.6□□□□□ -0.07
SHANK3-203ENST00000445220 CACNA1AO00555 2505 aa14.6□□□□□ -0.07
SHANK3-203ENST00000445220 HELZP42694 1942 aaKnown RBP14.6□□□□□ -0.07
SHANK3-203ENST00000445220 RNF138Q8WVD3 245 aa14.6□□□□□ -0.07
SHANK3-203ENST00000445220 E9PLD3 99 aa14.6□□□□□ -0.07
SHANK3-203ENST00000445220 NKAPP1Q8N9T2 125 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms