RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 TMEM88Q6PEY1 159 aa16.91■□□□□ 0.3
C9orf3-207ENST00000445181 Q86TA4 180 aa16.91■□□□□ 0.3
C9orf3-207ENST00000445181 LINC00612Q8N6U2 182 aa16.91■□□□□ 0.3
C9orf3-207ENST00000445181 TRGV2A0A075B6R0 118 aa16.9■□□□□ 0.3
C9orf3-207ENST00000445181 AKR1C3P42330 323 aa16.9■□□□□ 0.3
C9orf3-207ENST00000445181 FMC1Q96HJ9 113 aa16.9■□□□□ 0.3
C9orf3-207ENST00000445181 GNG13Q9P2W3 67 aa16.9■□□□□ 0.3
C9orf3-207ENST00000445181 TRAV1-1A0A0B4J248 108 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 PFN1P07737 140 aaKnown RBP16.89■□□□□ 0.29
C9orf3-207ENST00000445181 ZNF80P51504 273 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-207ENST00000445181 CCL20P78556 96 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 TDRG1Q3Y452 100 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 KCNS1Q96KK3 526 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 SDF2L1Q9HCN8 221 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 MANBALQ9NQG1 85 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 MDFICQ9P1T7 246 aa16.89■□□□□ 0.29
C9orf3-207ENST00000445181 SPINK4O60575 86 aa16.88■□□□□ 0.29
C9orf3-207ENST00000445181 MRPL16Q9NX20 251 aaKnown RBP16.88■□□□□ 0.29
C9orf3-207ENST00000445181 GNRH2O43555 120 aa16.87■□□□□ 0.29
C9orf3-207ENST00000445181 OR5I1Q13606 314 aa16.86■□□□□ 0.29
C9orf3-207ENST00000445181 LGALS9BQ3B8N2 356 aa16.86■□□□□ 0.29
C9orf3-207ENST00000445181 ALKAL2Q6UX46 152 aa16.86■□□□□ 0.29
C9orf3-207ENST00000445181 ZFP30Q9Y2G7 519 aa16.86■□□□□ 0.29
C9orf3-207ENST00000445181 SCO2A0A1W2PP80 73 aa16.85■□□□□ 0.29
C9orf3-207ENST00000445181 TYMSP04818 313 aa16.85■□□□□ 0.29
C9orf3-207ENST00000445181 SPXQ9BT56 116 aa16.85■□□□□ 0.29
C9orf3-207ENST00000445181 VPS13DQ5THJ4 4388 aa16.84■□□□□ 0.29
C9orf3-207ENST00000445181 IFNA1P01562 189 aa16.84■□□□□ 0.29
C9orf3-207ENST00000445181 C15orf53Q8NAA6 179 aa16.84■□□□□ 0.29
C9orf3-207ENST00000445181 BOLA1Q9Y3E2 137 aa16.84■□□□□ 0.29
C9orf3-207ENST00000445181 IGHV3-16A0A0C4DH30 117 aa16.83■□□□□ 0.28
C9orf3-207ENST00000445181 S100A9P06702 114 aaKnown RBP16.83■□□□□ 0.28
C9orf3-207ENST00000445181 C11orf21Q9P2W6 132 aa16.83■□□□□ 0.28
C9orf3-207ENST00000445181 TRBV6-1A0A0K0K1D8 114 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 FABP5P3A8MUU1 101 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 LTAP01374 205 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 P0DMU3 169 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 FAM231AP0DMU4 169 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 FAM231CP0DMU5 169 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 ZC2HC1AQ96GY0 325 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 C18orf15Q96N68 181 aa16.82■□□□□ 0.28
C9orf3-207ENST00000445181 NUDT3O95989 172 aa16.81■□□□□ 0.28
C9orf3-207ENST00000445181 HOXA5P20719 270 aa16.81■□□□□ 0.28
C9orf3-207ENST00000445181 TRAV26-1A0A087WT03 109 aa16.8■□□□□ 0.28
C9orf3-207ENST00000445181 IGHV3-53P01767 116 aa16.8■□□□□ 0.28
C9orf3-207ENST00000445181 TXNDC17Q9BRA2 123 aa16.8■□□□□ 0.28
C9orf3-207ENST00000445181 BIRC6Q9NR09 4857 aa16.8■□□□□ 0.28
C9orf3-207ENST00000445181 A0A0J9YY99 117 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 M0R2P5 195 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 ORM1P02763 201 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 BLOC1S1P78537 153 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 FAM162BQ5T6X4 162 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 UBE2DNLQ8IWF7 75 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 NHLRC2Q8NBF2 726 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 KMT2AQ03164 3969 aa16.79■□□□□ 0.28
C9orf3-207ENST00000445181 COX8CQ7Z4L0 72 aa16.78■□□□□ 0.28
C9orf3-207ENST00000445181 SH2D1AO60880 128 aa16.77■□□□□ 0.28
C9orf3-207ENST00000445181 BCL2P10415 239 aa16.77■□□□□ 0.28
C9orf3-207ENST00000445181 MEF2BQ02080 365 aaPredicted RBP16.77■□□□□ 0.28
C9orf3-207ENST00000445181 BAGE2Q86Y30 109 aa16.77■□□□□ 0.28
C9orf3-207ENST00000445181 RASL10AQ92737 203 aa16.77■□□□□ 0.28
C9orf3-207ENST00000445181 B4DEV8 164 aa16.76■□□□□ 0.27
C9orf3-207ENST00000445181 S100A4P26447 101 aaKnown RBP16.76■□□□□ 0.27
C9orf3-207ENST00000445181 RPL35P42766 123 aaKnown RBP16.76■□□□□ 0.27
C9orf3-207ENST00000445181 CRIP1P50238 77 aa16.76■□□□□ 0.27
C9orf3-207ENST00000445181 MUC4Q99102 2169 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 IGKV3D-20A0A0C4DH25 116 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 M0R036 132 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 PDE6DO43924 150 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 POM121L12Q8N7R1 296 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 C11orf52Q96A22 123 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 VAX2Q9UIW0 290 aa16.75■□□□□ 0.27
C9orf3-207ENST00000445181 C9JCJ5 164 aa16.74■□□□□ 0.27
C9orf3-207ENST00000445181 TAGLN2P37802 199 aaKnown RBP16.74■□□□□ 0.27
C9orf3-207ENST00000445181 ASIPP42127 132 aa16.74■□□□□ 0.27
C9orf3-207ENST00000445181 ZNF674Q2M3X9 581 aa16.74■□□□□ 0.27
C9orf3-207ENST00000445181 TRGV4A0A0C4DH28 118 aa16.73■□□□□ 0.27
C9orf3-207ENST00000445181 ZNF876PQ49A33 203 aa16.73■□□□□ 0.27
C9orf3-207ENST00000445181 DERL1Q9BUN8 251 aa16.73■□□□□ 0.27
C9orf3-207ENST00000445181 MED9Q9NWA0 146 aa16.73■□□□□ 0.27
C9orf3-207ENST00000445181 SFTA3P0C7M3 94 aa16.72■□□□□ 0.27
C9orf3-207ENST00000445181 OR4C5Q8NGB2 326 aa16.72■□□□□ 0.27
C9orf3-207ENST00000445181 C9orf85Q96MD7 179 aa16.72■□□□□ 0.27
C9orf3-207ENST00000445181 TMSB15BA0A087X1C1 80 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 TRAV4A0A0B4J268 109 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 KRBOX1C9JBD0 128 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 H3BNG1 76 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 RNASE3P12724 160 aaKnown RBP16.71■□□□□ 0.27
C9orf3-207ENST00000445181 SLAQ13239 276 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 PRR27Q6MZM9 219 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 ZNF479Q96JC4 524 aa16.71■□□□□ 0.27
C9orf3-207ENST00000445181 GRIFINA4D1Z8 144 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 PAX4O43316 350 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 FHL2Q14192 279 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 RNF212Q495C1 297 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 MLST8Q9BVC4 326 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 PRO0255Q9UI72 69 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 HHLA3Q9XRX5 114 aa16.7■□□□□ 0.26
C9orf3-207ENST00000445181 LINC01559Q495D7 138 aa16.69■□□□□ 0.26
C9orf3-207ENST00000445181 CENPWQ5EE01 88 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms