RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
TREX1-202ENST00000444177 DAZ2Q13117 558 aaKnown RBP9.83□□□□□ -0.84
TREX1-202ENST00000444177 IBA57Q5T440 356 aaKnown RBP9.83□□□□□ -0.84
TREX1-202ENST00000444177 CYB561D1Q8N8Q1 229 aa9.83□□□□□ -0.84
TREX1-202ENST00000444177 KRTAP17-1Q9BYP8 105 aa9.83□□□□□ -0.84
TREX1-202ENST00000444177 NAGKQ9UJ70 344 aa9.83□□□□□ -0.84
TREX1-202ENST00000444177 TRGV2A0A075B6R0 118 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 TRGV1A0A0A0MS02 117 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 PRSS29PA6NIE9 313 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 IFNA7P01567 189 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 TAGLN2P37802 199 aaKnown RBP9.82□□□□□ -0.84
TREX1-202ENST00000444177 OR5I1Q13606 314 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 Q6AWC8 147 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 Q6ZR54 194 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 SGK494Q96LW2 274 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 NDFIP1Q9BT67 221 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 KLF12Q9Y4X4 402 aa9.82□□□□□ -0.84
TREX1-202ENST00000444177 PEX7O00628 323 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 PAGE4O60829 102 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 IFNA1P01562 189 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 CST9LP1Q5W188 147 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 LYPD6BQ8NI32 183 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 TREM1Q9NP99 234 aa9.81□□□□□ -0.84
TREX1-202ENST00000444177 PKHD1P08F94 4074 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 TRAV26-1A0A087WT03 109 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 A0A1B0GV50 99 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 IGLV2-11P01706 119 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 HOXA5P20719 270 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 CCL20P78556 96 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 FAM159AQ6UWV7 190 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 TVP23CQ96ET8 276 aa9.8□□□□□ -0.84
TREX1-202ENST00000444177 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
TREX1-202ENST00000444177 NACAE9PAV3 2078 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 TRGV11A0A075B6L2 103 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 TRAV21A0A0B4J279 112 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 A0A0J9YY99 117 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 SPINK4O60575 86 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
TREX1-202ENST00000444177 FLI1Q01543 452 aaPredicted RBP9.79□□□□□ -0.84
TREX1-202ENST00000444177 TMEM183BQ1AE95 376 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 SAPCD1Q5SSQ6 148 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 TMEM183AQ8IXX5 376 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 FMC1Q96HJ9 113 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 GNG13Q9P2W3 67 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 PSG8Q9UQ74 426 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 DNAH11Q96DT5 4516 aa9.79□□□□□ -0.84
TREX1-202ENST00000444177 FAM3BP58499 235 aaPredicted RBP9.78□□□□□ -0.84
TREX1-202ENST00000444177 PRNTQ86SH4 94 aa9.78□□□□□ -0.84
TREX1-202ENST00000444177 PKD1P98161 4303 aa9.78□□□□□ -0.84
TREX1-202ENST00000444177 IGHV3-53P01767 116 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 BCL2P10415 239 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 MEF2BQ02080 365 aaPredicted RBP9.77□□□□□ -0.85
TREX1-202ENST00000444177 C11orf52Q96A22 123 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 C18orf15Q96N68 181 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 C8orf49Q96NF6 230 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 MDFICQ9P1T7 246 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 VAX2Q9UIW0 290 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 ZFP30Q9Y2G7 519 aa9.77□□□□□ -0.85
TREX1-202ENST00000444177 DYNC1H1Q14204 4646 aaKnown RBP9.76□□□□□ -0.85
TREX1-202ENST00000444177 PDE6DO43924 150 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 CCL18P55774 89 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 UBE2G1P62253 170 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 SOHLH1Q5JUK2 328 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 C1orf134Q5TEV5 83 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 COX8CQ7Z4L0 72 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 Q86TA4 180 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 SDF2L1Q9HCN8 221 aa9.76□□□□□ -0.85
TREX1-202ENST00000444177 TRAV34A0A0B4J273 112 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 NDUFS6O75380 124 aaKnown RBP9.75□□□□□ -0.85
TREX1-202ENST00000444177 GCGP01275 180 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 TYMSP04818 313 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 AKR1C3P42330 323 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 TDRG1Q3Y452 100 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 SMUG1Q53HV7 270 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 LINC00479Q96M42 142 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 PCLOQ9Y6V0 5065 aa9.75□□□□□ -0.85
TREX1-202ENST00000444177 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 GNRH2O43555 120 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 LTAP01374 205 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 ZNF80P51504 273 aaPredicted RBP9.74□□□□□ -0.85
TREX1-202ENST00000444177 ZNRF2Q8NHG8 242 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 KCNS1Q96KK3 526 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 SPXQ9BT56 116 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 MUC4Q99102 2169 aa9.74□□□□□ -0.85
TREX1-202ENST00000444177 IGHV3-16A0A0C4DH30 117 aa9.73□□□□□ -0.85
TREX1-202ENST00000444177 H3BNG1 76 aa9.73□□□□□ -0.85
TREX1-202ENST00000444177 PFN1P07737 140 aaKnown RBP9.73□□□□□ -0.85
TREX1-202ENST00000444177 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
TREX1-202ENST00000444177 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
TREX1-202ENST00000444177 LINC00588Q9Y4M8 146 aa9.73□□□□□ -0.85
TREX1-202ENST00000444177 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
TREX1-202ENST00000444177 RBFOX3A6NFN3 312 aa9.72□□□□□ -0.85
TREX1-202ENST00000444177 ZNF506Q5JVG8 444 aa9.72□□□□□ -0.85
TREX1-202ENST00000444177 SMIM12Q96EX1 92 aa9.72□□□□□ -0.85
TREX1-202ENST00000444177 TRGV4A0A0C4DH28 118 aa9.71□□□□□ -0.86
TREX1-202ENST00000444177 TMEM250H0YL14 139 aa9.71□□□□□ -0.86
TREX1-202ENST00000444177 M0R2P5 195 aa9.71□□□□□ -0.86
TREX1-202ENST00000444177 PAX4O43316 350 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms