RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SPXQ9BT56 116 aa7.69□□□□□ -1.18
HDAC6-211ENST00000443563 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
HDAC6-211ENST00000443563 VPS13DQ5THJ4 4388 aa7.69□□□□□ -1.18
HDAC6-211ENST00000443563 IGHV4-4A0A075B6R2 117 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 GAGE12BA1L429 117 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 FABP5P3A8MUU1 101 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 PDE6DO43924 150 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 GAGE7O76087 117 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 GAGE12FP0CL80 117 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 GAGE12GP0CL81 117 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 GAGE12IP0CL82 117 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 COX8CQ7Z4L0 72 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 TMEM183AQ8IXX5 376 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 TP53TG3Q9ULZ0 132 aa7.68□□□□□ -1.18
HDAC6-211ENST00000443563 TRGV2A0A075B6R0 118 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 TRGV1A0A0A0MS02 117 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 SCO2A0A1W2PP80 73 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 SPINK4O60575 86 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 LTAP01374 205 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 ZNF80P51504 273 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-211ENST00000443563 MEF2BQ02080 365 aaPredicted RBP7.67□□□□□ -1.18
HDAC6-211ENST00000443563 C18orf15Q96N68 181 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 VAX2Q9UIW0 290 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 APLNQ9ULZ1 77 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 BOLA1Q9Y3E2 137 aa7.67□□□□□ -1.18
HDAC6-211ENST00000443563 F5H768 121 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 TYMSP04818 313 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 BCL2P10415 239 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 FAM162BQ5T6X4 162 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 LGALS9CQ6DKI2 356 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 Q6ZTI0 123 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 C15orf53Q8NAA6 179 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 LINC00476Q8WZB0 136 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 C11orf52Q96A22 123 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 MDFICQ9P1T7 246 aa7.66□□□□□ -1.18
HDAC6-211ENST00000443563 IGHV3-16A0A0C4DH30 117 aa7.65□□□□□ -1.18
HDAC6-211ENST00000443563 GNRH2O43555 120 aa7.65□□□□□ -1.18
HDAC6-211ENST00000443563 LY6G6CO95867 125 aa7.65□□□□□ -1.18
HDAC6-211ENST00000443563 BAGE2Q86Y30 109 aa7.65□□□□□ -1.18
HDAC6-211ENST00000443563 LYPD6BQ8NI32 183 aa7.65□□□□□ -1.18
HDAC6-211ENST00000443563 ZC2HC1AQ96GY0 325 aa7.65□□□□□ -1.18
HDAC6-211ENST00000443563 RYR3Q15413 4870 aa7.65□□□□□ -1.19
HDAC6-211ENST00000443563 B4DEV8 164 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 M0R2P5 195 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 ORM1P02763 201 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 S100A4P26447 101 aaKnown RBP7.64□□□□□ -1.19
HDAC6-211ENST00000443563 RPL35P42766 123 aaKnown RBP7.64□□□□□ -1.19
HDAC6-211ENST00000443563 SLAQ13239 276 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 ZNF674Q2M3X9 581 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 TMEM88Q6PEY1 159 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 RASL10AQ92737 203 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 SMIM12Q96EX1 92 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 MRPL16Q9NX20 251 aaKnown RBP7.64□□□□□ -1.19
HDAC6-211ENST00000443563 C11orf21Q9P2W6 132 aa7.64□□□□□ -1.19
HDAC6-211ENST00000443563 RBFOX3A6NFN3 312 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 SH2D1AO60880 128 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 P0DMU3 169 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 FAM231AP0DMU4 169 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 FAM231CP0DMU5 169 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 ASIPP42127 132 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 CRIP1P50238 77 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 OR5I1Q13606 314 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 TEX261Q6UWH6 196 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 MLST8Q9BVC4 326 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 MED9Q9NWA0 146 aa7.63□□□□□ -1.19
HDAC6-211ENST00000443563 RYR2Q92736 4967 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 KRBOX1C9JBD0 128 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 H3BNG1 76 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 GNG4P50150 75 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 DNLZQ5SXM8 178 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 NHLRC2Q8NBF2 726 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 PTH2Q96A98 100 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 BIN3Q9NQY0 253 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 HYDINQ4G0P3 5121 aa7.62□□□□□ -1.19
HDAC6-211ENST00000443563 DNAH6Q9C0G6 4158 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 TRAV4A0A0B4J268 109 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 IGKV3D-20A0A0C4DH25 116 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 TMEM250H0YL14 139 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 CIDEAO60543 219 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
HDAC6-211ENST00000443563 HOXA5P20719 270 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 CENPWQ5EE01 88 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 ZNF506Q5JVG8 444 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 PIK3CD-AS1Q5SR53 167 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 DAZAP1Q96EP5 407 aaKnown RBP7.61□□□□□ -1.19
HDAC6-211ENST00000443563 C9orf85Q96MD7 179 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 DERL1Q9BUN8 251 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 EIF5A2Q9GZV4 153 aaKnown RBP7.61□□□□□ -1.19
HDAC6-211ENST00000443563 IL36BQ9NZH7 164 aa7.61□□□□□ -1.19
HDAC6-211ENST00000443563 TRAV26-1A0A087WT03 109 aa7.6□□□□□ -1.19
HDAC6-211ENST00000443563 TRGV4A0A0C4DH28 118 aa7.6□□□□□ -1.19
HDAC6-211ENST00000443563 M0R036 132 aa7.6□□□□□ -1.19
HDAC6-211ENST00000443563 NUDT3O95989 172 aa7.6□□□□□ -1.19
HDAC6-211ENST00000443563 CXCL1P09341 107 aa7.6□□□□□ -1.19
HDAC6-211ENST00000443563 MGST1P10620 155 aaKnown RBP7.6□□□□□ -1.19
HDAC6-211ENST00000443563 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
HDAC6-211ENST00000443563 PRR27Q6MZM9 219 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms