RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ZFAND3Q9H8U3 227 aa6.21□□□□□ -1.41
CCDC39-201ENST00000442201 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.41
CCDC39-201ENST00000442201 IGHV3OR16-8A0A075B7F1 116 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 TRBV12-3P01733 135 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 HIST1H1EP10412 219 aaKnown RBP6.21□□□□□ -1.42
CCDC39-201ENST00000442201 FAM19A2Q8N3H0 131 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 TMEM70Q9BUB7 260 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 INAFM1C9JVW0 142 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 FABP2P12104 132 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 KIR3DS1Q14943 382 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 ZNF414Q96IQ9 312 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 VGLL1Q99990 258 aa6.21□□□□□ -1.42
CCDC39-201ENST00000442201 RNF152Q8N8N0 203 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 NDUFA4O00483 81 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 RPL7P18124 248 aaKnown RBP6.2□□□□□ -1.42
CCDC39-201ENST00000442201 Q6ZUT4 128 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 MYOZ3Q8TDC0 251 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 DAZAP1Q96EP5 407 aaKnown RBP6.2□□□□□ -1.42
CCDC39-201ENST00000442201 UBE2E2Q96LR5 201 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 METTL26Q96S19 204 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 PPDPFQ9H3Y8 114 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 LY96Q9Y6Y9 160 aa6.2□□□□□ -1.42
CCDC39-201ENST00000442201 FABP5P3A8MUU1 101 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 GGTLC3B5MD39 225 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 FGF6P10767 208 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 ISLRO14498 428 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 NDUFB4O95168 129 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 ATP6V0E2Q8NHE4 81 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 TPPP3Q9BW30 176 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 SCO2A0A1W2PP80 73 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 CLPSL1A2RUU4 121 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 HLA-DQA1P01909 254 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 LGALS1P09382 135 aaKnown RBP6.19□□□□□ -1.42
CCDC39-201ENST00000442201 FRMD6-AS1P0C7T7 363 aa6.19□□□□□ -1.42
CCDC39-201ENST00000442201 HIVEP1P15822 2718 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 TRBV20OR9-2A0A075B6H5 130 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 hDV102S1A0JD36 115 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 H3BTX0 84 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 BUB3O43684 328 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 CA1P00915 261 aaPredicted RBP6.18□□□□□ -1.42
CCDC39-201ENST00000442201 MT-ATP8P03928 68 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 SRIP30626 198 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 FAM106AQ4KMX7 169 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 C11orf52Q96A22 123 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 ZFHX3Q15911 3703 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 SYS1-DBNDD2H3BUS1 97 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 MRPS12O15235 138 aaKnown RBP6.18□□□□□ -1.42
CCDC39-201ENST00000442201 TCL1AP56279 114 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 RPEL1Q2QD12 228 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 UNQ9165/PRO28630Q6UXU0 137 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 TMEM190Q8WZ59 177 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 PRO0461Q9UI25 63 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 BAHCC1Q9P281 2608 aa6.18□□□□□ -1.42
CCDC39-201ENST00000442201 TRBV19A0A075B6N1 114 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 PGPA6NDG6 321 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GAGE12JA6NER3 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GAGE7O76087 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GAGE12FP0CL80 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GAGE12GP0CL81 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GAGE12IP0CL82 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GAGE4Q13068 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 Q6AWC8 147 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 WIPF2Q8TF74 440 aaPredicted RBP6.17□□□□□ -1.42
CCDC39-201ENST00000442201 Q9H3A6 140 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 IGHV3OR16-13A0A075B7E8 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 IGHV3-49A0A0A0MS15 119 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 IGHV3-74A0A0B4J1X5 117 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 M0R2Z0 102 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 CRLF1O75462 422 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 NTF3P20783 257 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 MYCNOSP40205 109 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 XGP55808 180 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 KHDC1LQ5JSQ8 128 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 TMEM78Q5T7P6 136 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 SAMD5Q5TGI4 173 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GPHB5Q86YW7 130 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 LINC01006Q8NI28 216 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 GTSF1Q8WW33 167 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 TMEM191AQ9H0A3 160 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 U3KQE9 123 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 V9GYV3 84 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 IGHV3-66A0A0C4DH42 116 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 SLC25A5P05141 298 aaKnown RBP6.17□□□□□ -1.42
CCDC39-201ENST00000442201 PDE6HQ13956 83 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 FAM162BQ5T6X4 162 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 RASL11AQ6T310 242 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 LYPD1Q8N2G4 141 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 OTORQ9NRC9 128 aa6.17□□□□□ -1.42
CCDC39-201ENST00000442201 NDUFA7O95182 113 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 APOHP02749 345 aaPredicted RBP6.16□□□□□ -1.42
CCDC39-201ENST00000442201 WFDC2Q14508 124 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 C17orf77Q96MU5 243 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 DAZ1Q9NQZ3 744 aaKnown RBP6.16□□□□□ -1.42
CCDC39-201ENST00000442201 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 NHLRC2Q8NBF2 726 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 AAMDCQ9H7C9 122 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 EPDR1Q9UM22 224 aa6.16□□□□□ -1.42
CCDC39-201ENST00000442201 IGHV4OR15-8A0A075B7B6 117 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms