RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 KRTDAPP60985 99 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 Q6AWC8 147 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 LCN12Q6JVE5 192 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 TEX43Q6ZNM6 134 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 FAM223AQ8IWN6 122 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 FAM19A2Q8N3H0 131 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 GATD1Q8NB37 220 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 PIFOQ8TCI5 191 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 CHCHD1Q96BP2 118 aaKnown RBP2.56□□□□□ -2
HMGB3P11-201ENST00000440127 RCHY1Q96PM5 261 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 METTL26Q96S19 204 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 C20orf144Q9BQM9 153 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 SLC50A1Q9BRV3 221 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 NDFIP1Q9BT67 221 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 VAMP8Q9BV40 100 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 PYGO1Q9Y3Y4 419 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 DOCK11Q5JSL3 2073 aa2.56□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF292O60281 2723 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 VCANP13611 3396 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3OR16-8A0A075B7F1 116 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV4-30-2A0A087WSY4 118 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGKV2-40A0A087WW87 121 aaPredicted RBP2.55□□□□□ -2
HMGB3P11-201ENST00000440127 TRAV40A0A0B4J280 105 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3-35A0A0C4DH35 117 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 KIR2DL5BA0A0G2JN68 375 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 KIR2DL5BA0A0G2JPC4 375 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 CLPSL1A2RUU4 121 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 RBAKDNA6NC62 111 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 A6NDX4 124 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 FABP5P3A8MUU1 101 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 B4DSR2 109 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 H3BUA1 57 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 M0QZK8 103 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 M0R143 59 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 SH2D1AO60880 128 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 BRI3O95415 125 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 SVILO95425 2214 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGKV2D-40P01614 121 aaPredicted RBP2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGHG2P01859 326 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 IGHG4P01861 327 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 TRGV3P03979 118 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 MSMBP08118 114 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 OR5AL1P0C617 328 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 ARMS2P0C7Q2 107 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 LINC00614P0C842 121 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 C3orf79P0CE67 100 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 PRB4P10163 310 aaPredicted RBP2.55□□□□□ -2
HMGB3P11-201ENST00000440127 SLC25A16P16260 332 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 SEC61GP60059 68 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 PMCHL1Q16048 86 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 LY6EQ16553 131 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 TDRG1Q3Y452 100 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 ARFGEF3Q5TH69 2177 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 RNASEKQ6P5S7 137 aaKnown RBP2.55□□□□□ -2
HMGB3P11-201ENST00000440127 LYZL1Q6UWQ5 148 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 BRD3OSQ6XYD6 125 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF705AQ6ZN79 300 aaPredicted RBP2.55□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF493Q6ZR52 646 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 KIR2DL5AQ8N109 375 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 Q8N976 141 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 C11orf45Q8TAV5 145 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 USMG5Q96IX5 58 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 MIEN1Q9BRT3 115 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 C2orf88Q9BSF0 95 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 CLEC5AQ9NY25 188 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 WDFY3Q8IZQ1 3526 aa2.55□□□□□ -2
HMGB3P11-201ENST00000440127 CNOT1A5YKK6 2376 aaKnown RBP2.54□□□□□ -2
HMGB3P11-201ENST00000440127 ZGRF1Q86YA3 2104 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 DMDP11532 3685 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 A0A0C4DFX4 3053 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 AKAP13Q12802 2813 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3OR16-13A0A075B7E8 117 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 TMSB15BA0A087X1C1 80 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3-74A0A0B4J1X5 117 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 TRAV8-2A0A0B4J237 113 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 IGHV3-66A0A0C4DH42 116 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 A0A0G2JLM5 398 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 H3BUX3 64 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 K7EQG2 157 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 NDUFA4O00483 81 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF207O43670 478 aaKnown RBP2.54□□□□□ -2
HMGB3P11-201ENST00000440127 ORM1P02763 201 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 IGLC6P0CF74 106 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 COX6B1P14854 86 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 GATA1P15976 413 aaPredicted RBP2.54□□□□□ -2
HMGB3P11-201ENST00000440127 HLA-DMBP28068 263 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF80P51504 273 aaPredicted RBP2.54□□□□□ -2
HMGB3P11-201ENST00000440127 ZNF138P52744 262 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 ERCC8Q13216 396 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 SPATA45Q537H7 98 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 LCE3CQ5T5A8 94 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 LINC00242Q5T6M2 205 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 TMEM78Q5T7P6 136 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 FAM104BQ5XKR9 115 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 EBLN2Q6P2I7 272 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 MRPL52Q86TS9 123 aaKnown RBP2.54□□□□□ -2
HMGB3P11-201ENST00000440127 LINC01561Q8N1V8 128 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 TMEM70Q9BUB7 260 aa2.54□□□□□ -2
HMGB3P11-201ENST00000440127 AGPAT4-IT1Q9H0P7 198 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms