RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 CAMPP49913 170 aa10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 ZNF80P51504 273 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 ZNF256Q9Y2P7 627 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF1A-204ENST00000440083 A0A1B0GUT8 65 aa10.84□□□□□ -0.67
TNFRSF1A-204ENST00000440083 A0A1B0GW15 77 aa10.84□□□□□ -0.67
TNFRSF1A-204ENST00000440083 FRMD6-AS1P0C7T7 363 aa10.84□□□□□ -0.67
TNFRSF1A-204ENST00000440083 CD300EQ496F6 205 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1A-204ENST00000440083 PSMG4Q5JS54 123 aa10.84□□□□□ -0.67
TNFRSF1A-204ENST00000440083 SIGLEC8Q9NYZ4 499 aa10.84□□□□□ -0.67
TNFRSF1A-204ENST00000440083 TRBV7-9A0A0J9YWB2 115 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 CRISP2P16562 243 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 FOXA3P55318 350 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 LINC01559Q495D7 138 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 EBLN2Q6P2I7 272 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 MRAPQ8TCY5 172 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 TGP01266 2768 aa10.83□□□□□ -0.68
TNFRSF1A-204ENST00000440083 TRAV2A0A0B4J234 112 aa10.82□□□□□ -0.68
TNFRSF1A-204ENST00000440083 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
TNFRSF1A-204ENST00000440083 F6UB75 175 aa10.82□□□□□ -0.68
TNFRSF1A-204ENST00000440083 FER1L6-AS1Q8NA97 138 aa10.82□□□□□ -0.68
TNFRSF1A-204ENST00000440083 J3KRW8 73 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 DUSP14O95147 198 aaKnown RBP10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 GPX1P07203 203 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 LEPP41159 167 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 DEFB1P60022 68 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 PDZD11Q5EBL8 140 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 COA6Q5JTJ3 125 aaKnown RBP10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 HIST3H2BBQ8N257 126 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 DNAH9Q9NYC9 4486 aa10.81□□□□□ -0.68
TNFRSF1A-204ENST00000440083 GRIFINA4D1Z8 144 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 SRIP30626 198 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 CTRLP40313 264 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 KIAA1644Q3SXP7 199 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 GDF5OSQ5U4N7 250 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 LYZL1Q6UWQ5 148 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 ODF3Q96PU9 254 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 SSBP4Q9BWG4 385 aaPredicted RBP10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 NAGKQ9UJ70 344 aa10.8□□□□□ -0.68
TNFRSF1A-204ENST00000440083 SLAQ13239 276 aa10.79□□□□□ -0.68
TNFRSF1A-204ENST00000440083 GFI1BQ5VTD9 330 aa10.79□□□□□ -0.68
TNFRSF1A-204ENST00000440083 BAGE3Q86Y29 109 aa10.79□□□□□ -0.68
TNFRSF1A-204ENST00000440083 ZFAND2AQ8N6M9 145 aa10.79□□□□□ -0.68
TNFRSF1A-204ENST00000440083 FAM19A4Q96LR4 140 aa10.79□□□□□ -0.68
TNFRSF1A-204ENST00000440083 ZMAT5Q9UDW3 170 aaKnown RBP10.79□□□□□ -0.68
TNFRSF1A-204ENST00000440083 A0A0J9YX75 114 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 OR4C46A6NHA9 309 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 IGLC6P0CF74 106 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 OR10J3Q5JRS4 329 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 PRR9Q5T870 116 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 FOXI2Q6ZQN5 318 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 OR2K2Q8NGT1 345 aa10.78□□□□□ -0.68
TNFRSF1A-204ENST00000440083 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 F2Z2F3 143 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TSPOP30536 169 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 Q0VG73 95 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 DEFB121Q5J5C9 76 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 APRG1Q8IVJ8 170 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 GATD1Q8NB37 220 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TMEM18Q96B42 140 aa10.77□□□□□ -0.69
TNFRSF1A-204ENST00000440083 IGKV3D-20A0A0C4DH25 116 aa10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 CD7P09564 240 aa10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 FABP4P15090 132 aa10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TWIST1Q15672 202 aa10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 Q8N1Y9 231 aa10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SPAG8Q99932 426 aaPredicted RBP10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 WFDC10AQ9H1F0 79 aa10.76□□□□□ -0.69
TNFRSF1A-204ENST00000440083 IGKV3-20P01619 116 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 ASIPP42127 132 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 DEFB131AP59861 70 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SSTP61278 116 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 OR10D4PQ8NGN7 298 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 C11orf21Q9P2W6 132 aa10.75□□□□□ -0.69
TNFRSF1A-204ENST00000440083 LOC102724200A0A096LPH7 203 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 C7orf71A4D174 169 aa10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 KLLNB2CW77 178 aa10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 S100A4P26447 101 aaKnown RBP10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 CACNG7P62955 275 aa10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SMIM15Q7Z3B0 74 aa10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 PACRGQ96M98 296 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 HIST1H2BLQ99880 126 aa10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 ALKBH7Q9BT30 221 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF1A-204ENST00000440083 MUC21A0A0G2JKD1 596 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 MUC21A0A140T8X8 626 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 H3BVH4 76 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 SERF1AO75920 110 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 AMBPP02760 352 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 ZNF493Q6ZR52 646 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 CNFNQ9BYD5 112 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 MAP6D1Q9H9H5 199 aa10.73□□□□□ -0.69
TNFRSF1A-204ENST00000440083 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 MED14OSP0DP75 135 aa10.72□□□□□ -0.69
TNFRSF1A-204ENST00000440083 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms