RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 GAGE7O76087 117 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 GAGE12FP0CL80 117 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 GAGE12GP0CL81 117 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 GAGE12IP0CL82 117 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 SOHLH1Q5JUK2 328 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 Q6AWC8 147 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
ITGB1-207ENST00000439974 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 FAM3BP58499 235 aaPredicted RBP11.27□□□□□ -0.61
ITGB1-207ENST00000439974 TMEM183BQ1AE95 376 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 Q6ZTI0 123 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 TMEM183AQ8IXX5 376 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 LINC00467Q9BRT7 94 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 NDFIP1Q9BT67 221 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 MDFICQ9P1T7 246 aa11.27□□□□□ -0.61
ITGB1-207ENST00000439974 GNRH2O43555 120 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 MED14OSP0DP75 135 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 SULT1A2P50226 295 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 ANXA2RQ3ZCQ2 193 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
ITGB1-207ENST00000439974 ALKAL2Q6UX46 152 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 GNG13Q9P2W3 67 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 ARL2-SNX15V9GYD0 113 aa11.26□□□□□ -0.61
ITGB1-207ENST00000439974 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
ITGB1-207ENST00000439974 F5H768 121 aa11.25□□□□□ -0.61
ITGB1-207ENST00000439974 GCGP01275 180 aa11.25□□□□□ -0.61
ITGB1-207ENST00000439974 Q86TA4 180 aa11.25□□□□□ -0.61
ITGB1-207ENST00000439974 ZNF680Q8NEM1 530 aa11.25□□□□□ -0.61
ITGB1-207ENST00000439974 MRPL16Q9NX20 251 aaKnown RBP11.25□□□□□ -0.61
ITGB1-207ENST00000439974 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
ITGB1-207ENST00000439974 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
ITGB1-207ENST00000439974 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
ITGB1-207ENST00000439974 ATP5G1P05496 136 aa11.24□□□□□ -0.61
ITGB1-207ENST00000439974 C1orf134Q5TEV5 83 aa11.24□□□□□ -0.61
ITGB1-207ENST00000439974 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
ITGB1-207ENST00000439974 NKX6-2Q9C056 277 aaPredicted RBP11.24□□□□□ -0.61
ITGB1-207ENST00000439974 ABCA13Q86UQ4 5058 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 PPT1P50897 306 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 RAB5CP51148 216 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 TCL1AP56279 114 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
ITGB1-207ENST00000439974 SMUG1Q53HV7 270 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 HIST1H2BAQ96A08 127 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 MUC4Q99102 2169 aa11.23□□□□□ -0.61
ITGB1-207ENST00000439974 NUDT3O95989 172 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 TYMSP04818 313 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 AKR1C3P42330 323 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 LINC00612Q8N6U2 182 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
ITGB1-207ENST00000439974 LRP1BQ9NZR2 4599 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 TRAV1-1A0A0B4J248 108 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 SPINK4O60575 86 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 HOXA5P20719 270 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 UBE2G1P62253 170 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 OR5I1Q13606 314 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 SAPCD1Q5SSQ6 148 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 IBA57Q5T440 356 aaKnown RBP11.21□□□□□ -0.61
ITGB1-207ENST00000439974 ZC2HC1AQ96GY0 325 aa11.21□□□□□ -0.61
ITGB1-207ENST00000439974 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
ITGB1-207ENST00000439974 IGHV3-16A0A0C4DH30 117 aa11.2□□□□□ -0.62
ITGB1-207ENST00000439974 FMC1Q96HJ9 113 aa11.2□□□□□ -0.62
ITGB1-207ENST00000439974 SDF2L1Q9HCN8 221 aa11.2□□□□□ -0.62
ITGB1-207ENST00000439974 A0A0J9YY99 117 aa11.19□□□□□ -0.62
ITGB1-207ENST00000439974 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
ITGB1-207ENST00000439974 CRIP1P50238 77 aa11.19□□□□□ -0.62
ITGB1-207ENST00000439974 CCL18P55774 89 aa11.19□□□□□ -0.62
ITGB1-207ENST00000439974 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
ITGB1-207ENST00000439974 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
ITGB1-207ENST00000439974 MANBALQ9NQG1 85 aa11.19□□□□□ -0.62
ITGB1-207ENST00000439974 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
ITGB1-207ENST00000439974 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
ITGB1-207ENST00000439974 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
ITGB1-207ENST00000439974 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 IGKV3D-20A0A0C4DH25 116 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 TEX46H3BTG2 121 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 M0R036 132 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 SH2D1AO60880 128 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 LTAP01374 205 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 ZNF575Q86XF7 245 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 TCEAL7Q9BRU2 100 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 LINC00588Q9Y4M8 146 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 HSPG2P98160 4391 aa11.17□□□□□ -0.62
ITGB1-207ENST00000439974 SFTA3P0C7M3 94 aa11.16□□□□□ -0.62
ITGB1-207ENST00000439974 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
ITGB1-207ENST00000439974 PCNPQ8WW12 178 aaKnown RBP11.16□□□□□ -0.62
ITGB1-207ENST00000439974 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
ITGB1-207ENST00000439974 ZFP30Q9Y2G7 519 aa11.16□□□□□ -0.62
ITGB1-207ENST00000439974 TMSB15BA0A087X1C1 80 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 TRBV6-1A0A0K0K1D8 114 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 FABP5P3A8MUU1 101 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 C9JCJ5 164 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 ORM1P02763 201 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 BCL2P10415 239 aa11.15□□□□□ -0.62
ITGB1-207ENST00000439974 RPL35P42766 123 aaKnown RBP11.15□□□□□ -0.62
ITGB1-207ENST00000439974 RAB19A4D1S5 217 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms