RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 TRAV9-2A0A087WT02 112 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 TRAV4A0A0B4J268 109 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 FBLL1A6NHQ2 334 aaKnown RBP7.84□□□□□ -1.15
IRF1-204ENST00000439555 K7EQM0 130 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 CIDEAO60543 219 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 ARL14EPLP0DKL9 152 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 Q6ZRN7 208 aaPredicted RBP7.84□□□□□ -1.15
IRF1-204ENST00000439555 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 RAB24Q969Q5 203 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 ZNF479Q96JC4 524 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 NDFIP1Q9BT67 221 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 TNFSF18Q9UNG2 199 aa7.84□□□□□ -1.15
IRF1-204ENST00000439555 TRAV8-1A0A0A6YYK1 113 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 C9JCJ5 164 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 K7EQD1 137 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 GNRH2O43555 120 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 EIF3GO75821 320 aaKnown RBP eCLIP7.83□□□□□ -1.16
IRF1-204ENST00000439555 CXorf1O96002 111 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 TCRAP04437 139 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 GIPP09681 153 aaPredicted RBP7.83□□□□□ -1.16
IRF1-204ENST00000439555 ATP6V0CP27449 155 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 GCHFRP30047 84 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 SRIP30626 198 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 LINC00315P59091 139 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 SPATA12Q7Z6I5 190 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 HSD17B11Q8NBQ5 300 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 PCNPQ8WW12 178 aaKnown RBP7.83□□□□□ -1.16
IRF1-204ENST00000439555 TXNDC17Q9BRA2 123 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 SDF2L1Q9HCN8 221 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 TMEM167BQ9NRX6 74 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 NAGKQ9UJ70 344 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 RPH3ALQ9UNE2 315 aa7.83□□□□□ -1.16
IRF1-204ENST00000439555 TAAR5O14804 337 aa7.82□□□□□ -1.16
IRF1-204ENST00000439555 HMGB3O15347 200 aaKnown RBP7.82□□□□□ -1.16
IRF1-204ENST00000439555 SFTA3P0C7M3 94 aa7.82□□□□□ -1.16
IRF1-204ENST00000439555 TIRAPP58753 221 aa7.82□□□□□ -1.16
IRF1-204ENST00000439555 INO80EQ8NBZ0 244 aaPredicted RBP7.82□□□□□ -1.16
IRF1-204ENST00000439555 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
IRF1-204ENST00000439555 PTH2Q96A98 100 aa7.82□□□□□ -1.16
IRF1-204ENST00000439555 ACTR3CQ9C0K3 210 aaPredicted RBP7.82□□□□□ -1.16
IRF1-204ENST00000439555 BOLA1Q9Y3E2 137 aa7.82□□□□□ -1.16
IRF1-204ENST00000439555 TYMSP04818 313 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 GYPEP15421 78 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
IRF1-204ENST00000439555 GNG5P63218 68 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 SAPCD1Q5SSQ6 148 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 EPDR1Q9UM22 224 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 LY96Q9Y6Y9 160 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 FAT1Q14517 4588 aa7.81□□□□□ -1.16
IRF1-204ENST00000439555 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 BORCS7-ASMTA0A0B4J1R7 106 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 A0A1W2PRE2 83 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 F6UZH7 168 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 IGLV2-11P01706 119 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 PFN1P07737 140 aaKnown RBP7.8□□□□□ -1.16
IRF1-204ENST00000439555 DNAH10OSP0CZ25 163 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 GATA1P15976 413 aaPredicted RBP7.8□□□□□ -1.16
IRF1-204ENST00000439555 KRTAP10-2P60368 255 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 FLI1Q01543 452 aaPredicted RBP7.8□□□□□ -1.16
IRF1-204ENST00000439555 Q5BKY6 102 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 CYB561D1Q8N8Q1 229 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 TMEM75Q8N9X5 138 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 PSG8Q9UQ74 426 aa7.8□□□□□ -1.16
IRF1-204ENST00000439555 RNF222A6NCQ9 220 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 GGTLC3B5MD39 225 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 EREGO14944 169 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 EVI2AP22794 236 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 ZNF876PQ49A33 203 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 SMUG1Q53HV7 270 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 PIK3CD-AS1Q5SR53 167 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 NKX6-2Q9C056 277 aaPredicted RBP7.79□□□□□ -1.16
IRF1-204ENST00000439555 SH3BGRL3Q9H299 93 aa7.79□□□□□ -1.16
IRF1-204ENST00000439555 TRBV6-4A0A1B0GX49 114 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 GCGP01275 180 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 ZNF80P51504 273 aaPredicted RBP7.78□□□□□ -1.16
IRF1-204ENST00000439555 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 ZFP69Q49AA0 526 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 RPL7L1Q6DKI1 246 aaKnown RBP7.78□□□□□ -1.16
IRF1-204ENST00000439555 CDPF1Q6NVV7 123 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 SGK494Q96LW2 274 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 C9orf85Q96MD7 179 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
IRF1-204ENST00000439555 CTXND1A0A1B0GTU2 59 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 RS1O15537 224 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 CFAP126Q5VTH2 177 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 PRNTQ86SH4 94 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 WFDC10BQ8IUB3 73 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 OR2T35Q8NGX2 323 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 MSRB1Q9NZV6 116 aa7.77□□□□□ -1.17
IRF1-204ENST00000439555 SRRM2Q9UQ35 2752 aaKnown RBP7.76□□□□□ -1.17
IRF1-204ENST00000439555 FXYD6-FXYD2A0A087WZ82 144 aa7.76□□□□□ -1.17
IRF1-204ENST00000439555 RNASE3P12724 160 aaKnown RBP7.76□□□□□ -1.17
IRF1-204ENST00000439555 PPT1P50897 306 aa7.76□□□□□ -1.17
IRF1-204ENST00000439555 RHOHQ15669 191 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms