RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 Q0VG73 95 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 KIR3DS1Q14943 382 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 SAMD5Q5TGI4 173 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 TMEM75Q8N9X5 138 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 CFHR4Q92496 578 aa9.04□□□□□ -0.96
TRAPPC9-202ENST00000438773 IGKV3D-20A0A0C4DH25 116 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 HBDP02042 147 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 FANCD2OSQ96PS1 177 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 HLA-DMBP28068 263 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 CTRLP40313 264 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 CD300EQ496F6 205 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 OCIAD2Q56VL3 154 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 VPREB3Q9UKI3 123 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 CYSLTR1Q9Y271 337 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 A0A1W2PPR1 153 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 GP9P14770 177 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 RRN3P1Q2M238 152 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 LINC01587Q99440 93 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 KIR2DL4Q99706 377 aa9.03□□□□□ -0.96
TRAPPC9-202ENST00000438773 TNFRSF13BO14836 293 aaPredicted RBP9.02□□□□□ -0.96
TRAPPC9-202ENST00000438773 MRPL27Q9P0M9 148 aaKnown RBP9.02□□□□□ -0.96
TRAPPC9-202ENST00000438773 ZNF492Q9P255 531 aa9.02□□□□□ -0.96
TRAPPC9-202ENST00000438773 IGKV1D-37A0A075B6S9 117 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 ZNF503Q96F45 646 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 PRR25Q96S07 402 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 ZC2HC1BQ5TFG8 222 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 FAM231DQ6ZW35 169 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 SPRY2O43597 315 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
TRAPPC9-202ENST00000438773 TRAV12-3A0A0B4J271 114 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 LY6LH3BQJ8 138 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 STHQ8IWL8 128 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 PPBPP02775 128 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 VGLL1Q99990 258 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 BBC3Q96PG8 261 aaPredicted RBP9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 DMXL2Q8TDJ6 3036 aa9.01□□□□□ -0.97
TRAPPC9-202ENST00000438773 LINC01548A6NM66 108 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 H3BUA1 57 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 SAP30O75446 220 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 ETDBQ3ZM63 59 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 CT83Q5H943 113 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 AMTNQ6UX39 209 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 CRYGBP07316 175 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 ELANEP08246 267 aa9□□□□□ -0.97
TRAPPC9-202ENST00000438773 NPIPB6E9PJ23 425 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 PPP1R17O96001 155 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 IGLV2-8P01709 118 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 NPC2P61916 151 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 A6NJY4 79 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 K7ERJ3 54 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 LGALS3P17931 250 aaKnown RBP8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 GFRA4Q9GZZ7 299 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 FN1P02751 2386 aaKnown RBP8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 DEFB131AP59861 70 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 TCTEX1D4Q5JR98 221 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 GDF5OSQ5U4N7 250 aa8.99□□□□□ -0.97
TRAPPC9-202ENST00000438773 IGHV1-24A0A0C4DH33 117 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 A0A1B0GV72 72 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 DEFB121Q5J5C9 76 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 CHCHD1Q96BP2 118 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 SIGMAR1Q99720 223 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 RNASE1P07998 156 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 TTC32Q5I0X7 151 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 SPATA12Q7Z6I5 190 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 MRPL52Q86TS9 123 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 MRPS16Q9Y3D3 137 aaKnown RBP8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 IGHV7-4-1A0A0J9YVY3 117 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 SMIM27A0A1W2PRY6 76 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 BUB3O43684 328 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 LTAP01374 205 aa8.98□□□□□ -0.97
TRAPPC9-202ENST00000438773 IGHG2P01859 326 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 TMEM158Q8WZ71 300 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 HECTD1Q9ULT8 2610 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 AJUBAQ96IF1 538 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 H7C1H1 209 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 DPM2O94777 84 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 HSD52Q0P140 79 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 ACANP16112 2415 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 TRAV8-2A0A0B4J237 113 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 WI2-2373I1.2A0A1W2PRP0 233 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 ZNF815PA8K554 130 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 SEC11AP67812 179 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 SMPXQ9UHP9 88 aa8.97□□□□□ -0.97
TRAPPC9-202ENST00000438773 KALRNO60229 2985 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 LINC01619G3V211 115 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 IGKCP01834 107 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 EBI3Q14213 229 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 AGPAT4-IT1Q9H0P7 198 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 TNFRSF18Q9Y5U5 241 aa8.96□□□□□ -0.97
TRAPPC9-202ENST00000438773 ATP5LO75964 103 aa8.96□□□□□ -0.98
TRAPPC9-202ENST00000438773 ADAMTSL5Q6ZMM2 481 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms