RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PPDPFLQ8WWR9 84 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 MUCL1Q96DR8 90 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 RABAC1Q9UI14 185 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 MED1Q15648 1581 aaPredicted RBP2□□□□□ -2.09
LSM1P1-201ENST00000438629 DOCK1Q14185 1865 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 PATJQ8NI35 1801 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 DOCK2Q92608 1830 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 C1orf167Q5SNV9 1468 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 LRRC9Q6ZRR7 1453 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 C10orf71Q711Q0 1435 aa2□□□□□ -2.09
LSM1P1-201ENST00000438629 GPR179Q6PRD1 2367 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 UGGT1Q9NYU2 1555 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 NUP98P52948 1817 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 MYO18AQ92614 2054 aaKnown RBP1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 TRAV1-1A0A0B4J248 108 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 MUC21A0A140T8X8 626 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 HMSDA8MTL9 139 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 NUPR1O60356 82 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 IGKV1D-33P01593 117 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 IGKV1-33P01594 117 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 SFTA3P0C7M3 94 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 IGHV3-30-3P0DP02 117 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 ATP5EP56381 51 aaPredicted RBP1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 FXYD7P58549 80 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 PCBD1P61457 104 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 RPL30P62888 115 aaKnown RBP1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 MRPS36P82909 103 aaKnown RBP1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 SS18Q15532 418 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 ZFAND2AQ8N6M9 145 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 DAND5Q8N907 189 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 FAM213BQ8TBF2 198 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 DIRC1Q969H9 104 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 NPCDR1Q9BY65 106 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 DPH3P1Q9H4G8 78 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 RGPD2P0DJD1 1756 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 MCM3APO60318 1980 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 COL5A3P25940 1745 aaPredicted RBP1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 RALGAPBQ86X10 1494 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 HELZP42694 1942 aaKnown RBP1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 KIAA0556O60303 1618 aa1.99□□□□□ -2.09
LSM1P1-201ENST00000438629 ATAD5Q96QE3 1844 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 IQGAP2Q13576 1575 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 VWDEQ8N2E2 1590 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ADGRB3O60242 1522 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ABCC6O95255 1503 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 TICRRQ7Z2Z1 1910 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 PLXNB3Q9ULL4 1909 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 A8MWP4 228 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 H3BMM0 161 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 SYS1-DBNDD2H3BUS1 97 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 H3BUT2 72 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ATOX1O00244 68 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 CREBL2O60519 120 aaPredicted RBP1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 TIMM17BO60830 172 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 IGKCP01834 107 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 IGKV1-16P04430 117 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 FAUP35544 74 aaKnown RBP1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 FUSP35637 526 aaKnown RBP eCLIP1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 SSR2P43308 183 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 TSPEAR-AS2P59090 65 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ETDBQ3ZM63 59 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 SPINT4Q6UDR6 99 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 C15orf53Q8NAA6 179 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 MYOZ3Q8TDC0 251 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 UBE2WQ96B02 151 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ZNF714Q96N38 554 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ZNF142P52746 1687 aaPredicted RBP1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 OBSL1O75147 1896 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 DOCK8Q8NF50 2099 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 EML6Q6ZMW3 1958 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 RGPD8O14715 1765 aaPredicted RBP1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 RGPD5Q99666 1765 aa1.98□□□□□ -2.09
LSM1P1-201ENST00000438629 ANAPC1Q9H1A4 1944 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 UBR1Q8IWV7 1749 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 ATG2BQ96BY7 2078 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 WIZO95785 1651 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 CCDC88CQ9P219 2028 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 BTAF1O14981 1849 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 A0A0B4J2C4 111 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 UBE2L5PA0A1B0GUS4 154 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 hADV29S1A0JD25 119 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 C17orf51A8MQB3 221 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 C19orf84I3L1E1 186 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 SDCBPO00560 298 aaPredicted RBP1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 NPYP01303 97 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 IGHV3-53P01767 116 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 TRGV3P03979 118 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 COL8A2P25067 703 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 UBE2L3P68036 154 aaKnown RBP1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 INSL4Q14641 139 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 ELOBQ15370 118 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 PMCHL1Q16048 86 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 IGFBP7Q16270 282 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 XAF1Q6GPH4 301 aa1.97□□□□□ -2.09
LSM1P1-201ENST00000438629 ZNF322Q6U7Q0 402 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms