RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 NAGKQ9UJ70 344 aa13.27□□□□□ -0.29
HDAC6-208ENST00000438518 TP53TG3Q9ULZ0 132 aa13.27□□□□□ -0.29
HDAC6-208ENST00000438518 U3KQK5 164 aa13.27□□□□□ -0.29
HDAC6-208ENST00000438518 HUWE1Q7Z6Z7 4374 aaKnown RBP13.27□□□□□ -0.29
HDAC6-208ENST00000438518 IGHV4-28A0A0C4DH34 117 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 TMEM218A2RU14 115 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 C19orf71A6NCJ1 209 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 ZNF705GA8MUZ8 300 aaPredicted RBP13.26□□□□□ -0.29
HDAC6-208ENST00000438518 ORM1P02763 201 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 HTN1P15515 57 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 ZNF415Q09FC8 603 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 NDUFA5Q16718 116 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 FAM231DQ6ZW35 169 aa13.26□□□□□ -0.29
HDAC6-208ENST00000438518 K7EN84 100 aa13.25□□□□□ -0.29
HDAC6-208ENST00000438518 Q6ZQT7 251 aa13.25□□□□□ -0.29
HDAC6-208ENST00000438518 IGKV3D-20A0A0C4DH25 116 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 XKRY2A2RUG3 117 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 B4DEV8 164 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 KRBOX1C9JBD0 128 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 P01737 135 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 TYMSP04818 313 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 RPS20P60866 119 aaKnown RBP13.24□□□□□ -0.29
HDAC6-208ENST00000438518 RPL23P62829 140 aaKnown RBP13.24□□□□□ -0.29
HDAC6-208ENST00000438518 DNLZQ5SXM8 178 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 SEC11CQ9BY50 192 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 C11orf21Q9P2W6 132 aa13.24□□□□□ -0.29
HDAC6-208ENST00000438518 AZU1P20160 251 aa13.23□□□□□ -0.29
HDAC6-208ENST00000438518 TCL1AP56279 114 aa13.23□□□□□ -0.29
HDAC6-208ENST00000438518 OR5I1Q13606 314 aa13.23□□□□□ -0.29
HDAC6-208ENST00000438518 C11orf72Q8NBR9 251 aa13.23□□□□□ -0.29
HDAC6-208ENST00000438518 TIMM8BQ9Y5J9 83 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-208ENST00000438518 LYRM9A8MSI8 78 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 F8W036 122 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 ASIPP42127 132 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 ERVFC1-1P60608 527 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
HDAC6-208ENST00000438518 ADIRFQ15847 76 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 ISOC2Q96AB3 205 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 SPXQ9BT56 116 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 OSTCQ9NRP0 149 aa13.22□□□□□ -0.29
HDAC6-208ENST00000438518 IGHV3-16A0A0C4DH30 117 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 PLAC8L1A1L4L8 177 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 M0R036 132 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 MED14OSP0DP75 135 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 CT83Q5H943 113 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 NUDT10Q8NFP7 164 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 IL17DQ8TAD2 202 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 NUDT11Q96G61 164 aa13.21□□□□□ -0.29
HDAC6-208ENST00000438518 RPP21Q9H633 154 aaKnown RBP13.21□□□□□ -0.29
HDAC6-208ENST00000438518 A0A0J9YWU9 116 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 GNRH2O43555 120 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 SPART-AS1P0CW21 52 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 S100A4P26447 101 aaKnown RBP13.2□□□□□ -0.3
HDAC6-208ENST00000438518 OR2D3Q8NGH3 330 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 NDUFAF3Q9BU61 184 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 NBEAL2Q6ZNJ1 2754 aa13.2□□□□□ -0.3
HDAC6-208ENST00000438518 COL7A1Q02388 2944 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 GATCO43716 136 aaKnown RBP13.19□□□□□ -0.3
HDAC6-208ENST00000438518 PRM2P04554 102 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 ADCYAP1P18509 176 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 LGALS9BQ3B8N2 356 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 SFRP2Q96HF1 295 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 RNASE7Q9H1E1 156 aaKnown RBP13.19□□□□□ -0.3
HDAC6-208ENST00000438518 GSN-AS1Q9NRJ2 163 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 DKK2Q9UBU2 259 aa13.19□□□□□ -0.3
HDAC6-208ENST00000438518 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
HDAC6-208ENST00000438518 PTH2Q96A98 100 aa13.18□□□□□ -0.3
HDAC6-208ENST00000438518 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
HDAC6-208ENST00000438518 EDA2RQ9HAV5 297 aa13.18□□□□□ -0.3
HDAC6-208ENST00000438518 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
HDAC6-208ENST00000438518 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
HDAC6-208ENST00000438518 CXorf65A6NEN9 183 aa13.17□□□□□ -0.3
HDAC6-208ENST00000438518 A8MWL6 223 aa13.17□□□□□ -0.3
HDAC6-208ENST00000438518 RNASE3P12724 160 aaKnown RBP13.17□□□□□ -0.3
HDAC6-208ENST00000438518 EMP1P54849 157 aa13.17□□□□□ -0.3
HDAC6-208ENST00000438518 PIK3CD-AS1Q5SR53 167 aa13.17□□□□□ -0.3
HDAC6-208ENST00000438518 TMSB15BA0A087X1C1 80 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 A0A1W2PPQ1 181 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 PPP1R2P9O14990 202 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 DEFB4AO15263 64 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 SPINK4O60575 86 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 RPL19P84098 196 aaKnown RBP13.16□□□□□ -0.3
HDAC6-208ENST00000438518 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 OR10G8Q8NGN5 311 aa13.16□□□□□ -0.3
HDAC6-208ENST00000438518 NOP10Q9NPE3 64 aaKnown RBP13.16□□□□□ -0.3
HDAC6-208ENST00000438518 FAM231BA6NCW3 169 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 M0R2P5 195 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 SNAI2O43623 268 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 OR5AL1P0C617 328 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 ARMS2P0C7Q2 107 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 C11orf45Q8TAV5 145 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 C18orf15Q96N68 181 aa13.15□□□□□ -0.3
HDAC6-208ENST00000438518 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-208ENST00000438518 GFRA4Q9GZZ7 299 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms