RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 KLF5Q13887 457 aaPredicted RBP12.16□□□□□ -0.46
NEDD4-202ENST00000435532 ATRAIDQ6UW56 229 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 CXCL1P09341 107 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 ZC2HC1AQ96GY0 325 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 C20orf78Q9BR46 151 aa12.16□□□□□ -0.46
NEDD4-202ENST00000435532 POLEQ07864 2286 aa12.15□□□□□ -0.46
NEDD4-202ENST00000435532 MPDZO75970 2070 aa12.15□□□□□ -0.46
NEDD4-202ENST00000435532 TP53BP1Q12888 1972 aaPredicted RBP12.15□□□□□ -0.46
NEDD4-202ENST00000435532 TM2D2Q9BX73 214 aa12.15□□□□□ -0.46
NEDD4-202ENST00000435532 IGLV2-23P01705 113 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 KIAA1549LQ6ZVL6 1849 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 SPTBN1Q01082 2364 aaKnown RBP12.14□□□□□ -0.47
NEDD4-202ENST00000435532 ODF3BA8MYP8 253 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 MRPL51Q4U2R6 128 aaKnown RBP12.14□□□□□ -0.47
NEDD4-202ENST00000435532 BDP1A6H8Y1 2624 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 LTAP01374 205 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 GYPEP15421 78 aa12.14□□□□□ -0.47
NEDD4-202ENST00000435532 KIAA2026Q5HYC2 2103 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 DOCK7Q96N67 2140 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 K7EQD1 137 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 VWC2LB2RUY7 222 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 MSMPQ1L6U9 139 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 Q9HAA7 133 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
NEDD4-202ENST00000435532 HLA-DMBP28068 263 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 CRLF1O75462 422 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 TMEM126AQ9H061 195 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 GNRH2O43555 120 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 ESDP10768 282 aa12.12□□□□□ -0.47
NEDD4-202ENST00000435532 H3BMM0 161 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 SYS1-DBNDD2H3BUS1 97 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 UBE2BP63146 152 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 C17orf77Q96MU5 243 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 CUL9Q8IWT3 2517 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 WI2-2373I1.2A0A1W2PRP0 233 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 H3BUT2 72 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 SPRY2O43597 315 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 BUB3O43684 328 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 C11orf71Q6IPW1 123 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 DEFB135Q30KP9 77 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 Q6ZWC4 215 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 TRAV26-2A0A0B4J265 109 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 Q6ZQT7 251 aa12.11□□□□□ -0.47
NEDD4-202ENST00000435532 IGHG4P01861 327 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 ZNF726P1Q15940 193 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 ZC2HC1BQ5TFG8 222 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 NCKAP5O14513 1909 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 SMIM27A0A1W2PRY6 76 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 WIPF3A6NGB9 483 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 NDUFS6O75380 124 aaKnown RBP12.1□□□□□ -0.47
NEDD4-202ENST00000435532 PFN2P35080 140 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 CYYR1Q96J86 154 aa12.1□□□□□ -0.47
NEDD4-202ENST00000435532 DAZ2Q13117 558 aaKnown RBP12.09□□□□□ -0.47
NEDD4-202ENST00000435532 DAZ4Q86SG3 579 aaKnown RBP12.09□□□□□ -0.47
NEDD4-202ENST00000435532 DAZ3Q9NR90 486 aaKnown RBP12.09□□□□□ -0.47
NEDD4-202ENST00000435532 ROS1P08922 2347 aa12.09□□□□□ -0.47
NEDD4-202ENST00000435532 CFHR4Q92496 578 aa12.09□□□□□ -0.47
NEDD4-202ENST00000435532 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
NEDD4-202ENST00000435532 SNHG12Q9BXW3 62 aa12.09□□□□□ -0.47
NEDD4-202ENST00000435532 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
NEDD4-202ENST00000435532 A8MWP6 167 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 LINC00518Q8N0U6 118 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 K7EMI3 77 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 IGKV1-17P01599 117 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 SFTA2Q6UW10 78 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 ADAMTSL5Q6ZMM2 481 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 ODF3L1Q8IXM7 274 aa12.08□□□□□ -0.48
NEDD4-202ENST00000435532 HIST1H2BLQ99880 126 aa12.07□□□□□ -0.48
NEDD4-202ENST00000435532 SPATA25Q9BR10 227 aa12.07□□□□□ -0.48
NEDD4-202ENST00000435532 TRAV8-2A0A0B4J237 113 aa12.07□□□□□ -0.48
NEDD4-202ENST00000435532 V9GYV3 84 aa12.07□□□□□ -0.48
NEDD4-202ENST00000435532 COLCA2A8K830 154 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 Q0VG73 95 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 EDA2RQ9HAV5 297 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 HILS1P60008 231 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 ZNF625Q96I27 306 aaPredicted RBP12.06□□□□□ -0.48
NEDD4-202ENST00000435532 XCL1P47992 114 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 HHLA3Q9XRX5 114 aa12.06□□□□□ -0.48
NEDD4-202ENST00000435532 LGALS9O00182 355 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 C11orf45Q8TAV5 145 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 TRAV8-4A0A0B4J246 113 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 LINC00574Q9H8X3 128 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 SPANXA1Q9NS26 97 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 IGF1P05019 195 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 IGLL5B9A064 214 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 IGHV3-30P01768 117 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 IGHV3-33P01772 117 aa12.05□□□□□ -0.48
NEDD4-202ENST00000435532 IGHV3-30-3P0DP02 117 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms