RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 RNASE4P34096 147 aaKnown RBP5.86□□□□□ -1.47
CPSF6-202ENST00000435070 IGHV3OR16-8A0A075B7F1 116 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 IGHV3-49A0A0A0MS15 119 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 DEFB121Q5J5C9 76 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 TRAV26-2A0A0B4J265 109 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 IGHV3-35A0A0C4DH35 117 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 EGR2P11161 476 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-202ENST00000435070 LINC01587Q99440 93 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 SCNM1Q9BWG6 230 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 IGHV3OR16-13A0A075B7E8 117 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 IGHV3-74A0A0B4J1X5 117 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 NHLRC4P0CG21 123 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-202ENST00000435070 HOXD3P31249 432 aaPredicted RBP5.86□□□□□ -1.47
CPSF6-202ENST00000435070 PAX8Q06710 450 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 AJUBAQ96IF1 538 aa5.86□□□□□ -1.47
CPSF6-202ENST00000435070 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 CHKB-CPT1BH3BT56 60 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 ZNF493Q6ZR52 646 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 BOD1L1Q8NFC6 3051 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 PRB2P02812 416 aaPredicted RBP5.85□□□□□ -1.47
CPSF6-202ENST00000435070 ZNF625Q96I27 306 aaPredicted RBP5.85□□□□□ -1.47
CPSF6-202ENST00000435070 PKIGQ9Y2B9 76 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 SPTBN2O15020 2390 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 MALRD1Q5VYJ5 2156 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 TRAV4A0A0B4J268 109 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 SPRR3Q9UBC9 169 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 ABCA4P78363 2273 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 DMXL2Q8TDJ6 3036 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 FAM159AQ6UWV7 190 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 SAP25Q8TEE9 199 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 TRGV9Q99603 122 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 TRBV7-3A0A075B6L6 115 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 KLHL30-AS1Q8NEE0 82 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 C1orf162Q8NEQ5 155 aaPredicted RBP5.85□□□□□ -1.47
CPSF6-202ENST00000435070 U3KQK5 164 aa5.85□□□□□ -1.47
CPSF6-202ENST00000435070 TRBV19A0A075B6N1 114 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 CRLF1O75462 422 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 ZNF688P0C7X2 276 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 IFITM1P13164 125 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 GATD1Q8NB37 220 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 TMEM167AQ8TBQ9 72 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 BRI3O95415 125 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 C2orf82Q6UX34 121 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 CEACAM4O75871 244 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 ZNF80P51504 273 aaPredicted RBP5.84□□□□□ -1.47
CPSF6-202ENST00000435070 ZMAT4Q9H898 229 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 SIGLEC15Q6ZMC9 328 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 STHQ8IWL8 128 aa5.84□□□□□ -1.47
CPSF6-202ENST00000435070 SMG1Q96Q15 3661 aaKnown RBP5.84□□□□□ -1.47
CPSF6-202ENST00000435070 F8WEM9 126 aa5.84□□□□□ -1.48
CPSF6-202ENST00000435070 TCL1BO95988 128 aa5.84□□□□□ -1.48
CPSF6-202ENST00000435070 HLA-DMBP28068 263 aa5.84□□□□□ -1.48
CPSF6-202ENST00000435070 SRSF1Q07955 248 aaKnown RBP eCLIP5.84□□□□□ -1.481e-6■■■■□ 21.4
CPSF6-202ENST00000435070 Q6ZQT7 251 aa5.84□□□□□ -1.48
CPSF6-202ENST00000435070 SPRY2O43597 315 aa5.84□□□□□ -1.48
CPSF6-202ENST00000435070 C11orf44Q8N8P7 122 aa5.84□□□□□ -1.48
CPSF6-202ENST00000435070 ARHGAP32A7KAX9 2087 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 APC2O95996 2303 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 MGAQ8IWI9 3026 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 SPTA1P02549 2419 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 A0A0U1RQV1 116 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 MYMXA0A1B0GTQ4 84 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 NDUFV3P56181 108 aaKnown RBP5.83□□□□□ -1.48
CPSF6-202ENST00000435070 TRGV2A0A075B6R0 118 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 RNF185Q96GF1 192 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 C9JAW5 83 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 TNFRSF13BO14836 293 aaPredicted RBP5.83□□□□□ -1.48
CPSF6-202ENST00000435070 SLC25A16P16260 332 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 TMEM105Q8N8V8 129 aa5.83□□□□□ -1.48
CPSF6-202ENST00000435070 IGHV1-18A0A0C4DH31 117 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 TAL2Q16559 108 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 CLEC19AQ6UXS0 136 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 M0R2P5 195 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 PEMTQ9UBM1 199 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 WFDC9Q8NEX5 89 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 PIFOQ8TCI5 191 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 GAFA1Q96PS6 74 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 PRADC1Q9BSG0 188 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 SPRY4Q9C004 299 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 FABP5P3A8MUU1 101 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 PLNP26678 52 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 PSMG4Q5JS54 123 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 Q6ZT83 130 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 DTX2Q86UW9 622 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 DNAJC30Q96LL9 226 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 FAM110AQ9BQ89 295 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 CSMD1Q96PZ7 3565 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 IGKV1-17P01599 117 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 ATP6V0E2Q8NHE4 81 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 IGFBPL1Q8WX77 278 aa5.82□□□□□ -1.48
CPSF6-202ENST00000435070 B9A039 149 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 FCN3O75636 299 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 WT1P19544 449 aaPredicted RBP5.81□□□□□ -1.48
CPSF6-202ENST00000435070 CRIP2P52943 208 aaPredicted RBP5.81□□□□□ -1.48
CPSF6-202ENST00000435070 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 A0A087WX48 190 aa5.81□□□□□ -1.48
CPSF6-202ENST00000435070 CRYGCP07315 174 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms