RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 PRSS1P07477 247 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 LINC01545Q5VT33 79 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 METTL26Q96S19 204 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 PRSS22Q9GZN4 317 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 CKS2P33552 79 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 IGHV1-69DA0A0B4J2H0 117 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 WI2-2373I1.2A0A1W2PRP0 233 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 IGHV1-69P01742 117 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 PRR25Q96S07 402 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 DKK2Q9UBU2 259 aa12.01□□□□□ -0.49
SCARF1-203ENST00000434376 IGHV4-59P01825 116 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 KRTAP10-9P60411 292 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 SEC11AP67812 179 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 SMAGPQ0VAQ4 97 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 Q5PR19 223 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 SIGLEC8Q9NYZ4 499 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 OVOL3O00110 214 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 SCGB2A1O75556 95 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 EEF1AKMT3Q96AZ1 226 aa12□□□□□ -0.49
SCARF1-203ENST00000434376 C9orf118A6NHY6 69 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 M0R381 172 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 PAX2Q02962 417 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 C5orf56Q8N8D9 126 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 SMAD7O15105 426 aaKnown RBP11.99□□□□□ -0.49
SCARF1-203ENST00000434376 FABP2P12104 132 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 ZNF502Q8TBZ5 544 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 PAX8Q06710 450 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 Q8N6K4 173 aa11.99□□□□□ -0.49
SCARF1-203ENST00000434376 TMEM14CQ9P0S9 112 aa11.98□□□□□ -0.49
SCARF1-203ENST00000434376 HAX1O00165 279 aa11.98□□□□□ -0.49
SCARF1-203ENST00000434376 FAM110DQ8TAY7 271 aaPredicted RBP11.98□□□□□ -0.49
SCARF1-203ENST00000434376 BEX4Q9NWD9 120 aaPredicted RBP11.98□□□□□ -0.49
SCARF1-203ENST00000434376 BUB3O43684 328 aa11.98□□□□□ -0.49
SCARF1-203ENST00000434376 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
SCARF1-203ENST00000434376 IFI27L1Q96BM0 104 aa11.98□□□□□ -0.49
SCARF1-203ENST00000434376 NHP2Q9NX24 153 aaKnown RBP11.98□□□□□ -0.49
SCARF1-203ENST00000434376 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
SCARF1-203ENST00000434376 AGPAT4-IT1Q9H0P7 198 aa11.97□□□□□ -0.49
SCARF1-203ENST00000434376 ZNF492Q9P255 531 aa11.97□□□□□ -0.49
SCARF1-203ENST00000434376 MOB4Q9Y3A3 225 aa11.97□□□□□ -0.49
SCARF1-203ENST00000434376 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
SCARF1-203ENST00000434376 C8orf86Q6ZUL3 223 aa11.97□□□□□ -0.49
SCARF1-203ENST00000434376 NBEAL2Q6ZNJ1 2754 aa11.97□□□□□ -0.49
SCARF1-203ENST00000434376 H3BVH4 76 aa11.96□□□□□ -0.49
SCARF1-203ENST00000434376 K7EP34 96 aa11.96□□□□□ -0.49
SCARF1-203ENST00000434376 MSMBP08118 114 aa11.96□□□□□ -0.49
SCARF1-203ENST00000434376 CT83Q5H943 113 aa11.96□□□□□ -0.49
SCARF1-203ENST00000434376 ORMDL3Q8N138 153 aa11.96□□□□□ -0.49
SCARF1-203ENST00000434376 SAMD5Q5TGI4 173 aa11.96□□□□□ -0.5
SCARF1-203ENST00000434376 SFTA2Q6UW10 78 aa11.96□□□□□ -0.5
SCARF1-203ENST00000434376 OR4X2Q8NGF9 303 aa11.96□□□□□ -0.5
SCARF1-203ENST00000434376 GTSCR1Q86UQ5 136 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 GFRA4Q9GZZ7 299 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 TEX48A0A1B0GUV7 120 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 H3BRM9 83 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 IGHG4P01861 327 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 HSD52Q0P140 79 aa11.95□□□□□ -0.5
SCARF1-203ENST00000434376 NPYP01303 97 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 HBDP02042 147 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 DEFB136Q30KP8 78 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 DEFB112Q30KQ8 113 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 SPANXN1Q5VSR9 72 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 SAMD13Q5VXD3 122 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 PIFOQ8TCI5 191 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 SMIM13P0DJ93 91 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 RNASE4P34096 147 aaKnown RBP11.94□□□□□ -0.5
SCARF1-203ENST00000434376 TMEM160Q9NX00 188 aa11.94□□□□□ -0.5
SCARF1-203ENST00000434376 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 FXYD2P54710 66 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 C11orf21Q9P2W6 132 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 ZNF469Q96JG9 3925 aaPredicted RBP11.93□□□□□ -0.5
SCARF1-203ENST00000434376 CLPSL1A2RUU4 121 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 MRPL51Q4U2R6 128 aaKnown RBP11.93□□□□□ -0.5
SCARF1-203ENST00000434376 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 G3V4G9 280 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 MGPP08493 103 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 ZNF688P0C7X2 276 aa11.93□□□□□ -0.5
SCARF1-203ENST00000434376 A0A096LNJ9 63 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 OOSP1A8MZH6 123 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 LEPP41159 167 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 AMTNQ6UX39 209 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 FOXC2Q99958 501 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 FGF6P10767 208 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 SRSF8Q9BRL6 282 aaKnown RBP11.92□□□□□ -0.5
SCARF1-203ENST00000434376 TENM4Q6N022 2769 aa11.92□□□□□ -0.5
SCARF1-203ENST00000434376 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 IGKV2D-26A0A0A0MRZ7 120 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
SCARF1-203ENST00000434376 NPFFR1Q9GZQ6 430 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 TRAV12-2A0A075B6T6 113 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 COX6B1P14854 86 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 EBI3Q14213 229 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
SCARF1-203ENST00000434376 RHPN1-AS1Q9BWJ2 59 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms