RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 LGALS9CQ6DKI2 356 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 CLEC19AQ6UXS0 136 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 PRSS3P2Q8NHM4 247 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 PRELID3AQ96N28 172 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 ZNF747Q9BV97 191 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 NXT2Q9NPJ8 142 aaKnown RBP5.69□□□□□ -1.5
COL17A1-204ENST00000433822 S4R3C0 116 aa5.69□□□□□ -1.5
COL17A1-204ENST00000433822 VPS13CQ709C8 3753 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 A0A0G2JLM5 398 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 HSBP1L1C9JCN9 74 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 J3QLI3 93 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 K7EMT4 169 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 MSMBP08118 114 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 IGLL1P15814 213 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 CACNG7P62955 275 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 MRPL51Q4U2R6 128 aaKnown RBP5.68□□□□□ -1.5
COL17A1-204ENST00000433822 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 Q6ZN92 141 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 APRG1Q8IVJ8 170 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 OR1N2Q8NGR9 330 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 LINC00477Q96M19 166 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 CCL19Q99731 98 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 VGLL1Q99990 258 aa5.68□□□□□ -1.5
COL17A1-204ENST00000433822 TRAV8-2A0A0B4J237 113 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 TRAV40A0A0B4J280 105 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 IGHV4-61A0A0C4DH41 118 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 B4DSR2 109 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 D6R8Y8 96 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 G3V318 75 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 K7EMI3 77 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 OVOL1O14753 267 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 TCF21O43680 179 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 IGHV3-23P01764 117 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 TRGV3P03979 118 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 ZNF80P51504 273 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-204ENST00000433822 IL17RELQ6ZVW7 336 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 Q71RC1 249 aaPredicted RBP5.67□□□□□ -1.5
COL17A1-204ENST00000433822 ZNF575Q86XF7 245 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 SIGLEC8Q9NYZ4 499 aa5.67□□□□□ -1.5
COL17A1-204ENST00000433822 A0A096LNJ9 63 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 TMEM213A2RRL7 107 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 SOCS3O14543 225 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 DLEU1O43261 78 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 HBDP02042 147 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 ARL3P36405 182 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 CFHR3Q02985 330 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 FOXE3Q13461 319 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 SLC25A34Q6PIV7 304 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 C12orf54Q6X4T0 127 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 SMIM15Q7Z3B0 74 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 AMN1Q8IY45 258 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 ORAOV1Q8WV07 137 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 RNF185Q96GF1 192 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 AGPAT4-IT1Q9H0P7 198 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 MAP1LC3AQ9H492 121 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 SCRT2Q9NQ03 307 aa5.66□□□□□ -1.5
COL17A1-204ENST00000433822 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 IGHV7-4-1A0A0J9YVY3 117 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 LINC01548A6NM66 108 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 SIVA1O15304 175 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 ORM1P02763 201 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 CKS2P33552 79 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 ATP5J2P56134 94 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 TWIST1Q15672 202 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 Q8TAT8 98 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 MRAP2Q96G30 205 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 FAM19A4Q96LR4 140 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
COL17A1-204ENST00000433822 HRNRQ86YZ3 2850 aaPredicted RBP5.64□□□□□ -1.51
COL17A1-204ENST00000433822 TRAV21A0A0B4J279 112 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 M0QZ24 198 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 M0R381 172 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 NPYP01303 97 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 COX8AP10176 69 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 HLA-DRB4P13762 266 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 HLA-DMBP28068 263 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 FCER1GP30273 86 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 IFI27P40305 119 aaPredicted RBP5.64□□□□□ -1.51
COL17A1-204ENST00000433822 GPHB5Q86YW7 130 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 SMPXQ9UHP9 88 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 HLA-DRB4X5D2U9 266 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 CUBNO60494 3623 aa5.64□□□□□ -1.51
COL17A1-204ENST00000433822 ZANQ9Y493 2812 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 IGLV2-18A0A075B6J9 118 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 IGHV4-30-2A0A087WSY4 118 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 A0A096LNT2 108 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 H3BUX3 64 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 ATP5LO75964 103 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 TNFRSF6BO95407 300 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 PPP1R17O96001 155 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 CSN3P07498 182 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 IGHV4-38-2P0DP08 117 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 ZNF25P17030 456 aaPredicted RBP5.63□□□□□ -1.51
COL17A1-204ENST00000433822 RPL32P62910 135 aaKnown RBP5.63□□□□□ -1.51
COL17A1-204ENST00000433822 PRR31Q5SQ13 230 aa5.63□□□□□ -1.51
COL17A1-204ENST00000433822 LINC00173Q6ZV60 143 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms