RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PDE6DO43924 150 aa11.03□□□□□ -0.64
TREX1-201ENST00000433541 DAZ2Q13117 558 aaKnown RBP11.03□□□□□ -0.64
TREX1-201ENST00000433541 Q6ZTI0 123 aa11.03□□□□□ -0.64
TREX1-201ENST00000433541 C11orf72Q8NBR9 251 aa11.03□□□□□ -0.64
TREX1-201ENST00000433541 MED9Q9NWA0 146 aa11.03□□□□□ -0.64
TREX1-201ENST00000433541 MRPL16Q9NX20 251 aaKnown RBP11.03□□□□□ -0.64
TREX1-201ENST00000433541 CSMD3Q7Z407 3707 aa11.02□□□□□ -0.64
TREX1-201ENST00000433541 IGHV4-4A0A075B6R2 117 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 GNRH2O43555 120 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 LTAP01374 205 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 ORM1P02763 201 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 RPL35P42766 123 aaKnown RBP11.02□□□□□ -0.65
TREX1-201ENST00000433541 FAM162BQ5T6X4 162 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 BAGE2Q86Y30 109 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 ZC2HC1AQ96GY0 325 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 NDUFAF3Q9BU61 184 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 MDFICQ9P1T7 246 aa11.02□□□□□ -0.65
TREX1-201ENST00000433541 TRBV6-1A0A0K0K1D8 114 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 M0R036 132 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 TYMSP04818 313 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 S100A4P26447 101 aaKnown RBP11.01□□□□□ -0.65
TREX1-201ENST00000433541 CEBPGP53567 150 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 TDRG1Q3Y452 100 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 PRR27Q6MZM9 219 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 TEX261Q6UWH6 196 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
TREX1-201ENST00000433541 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
TREX1-201ENST00000433541 STARD9Q9P2P6 4700 aa11□□□□□ -0.65
TREX1-201ENST00000433541 RBFOX3A6NFN3 312 aa11□□□□□ -0.65
TREX1-201ENST00000433541 B4DEV8 164 aa11□□□□□ -0.65
TREX1-201ENST00000433541 SH2D1AO60880 128 aa11□□□□□ -0.65
TREX1-201ENST00000433541 MGST1P10620 155 aaKnown RBP11□□□□□ -0.65
TREX1-201ENST00000433541 OR5I1Q13606 314 aa11□□□□□ -0.65
TREX1-201ENST00000433541 PCNPQ8WW12 178 aaKnown RBP11□□□□□ -0.65
TREX1-201ENST00000433541 C11orf52Q96A22 123 aa11□□□□□ -0.65
TREX1-201ENST00000433541 SPXQ9BT56 116 aa11□□□□□ -0.65
TREX1-201ENST00000433541 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 LY6G6CO95867 125 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 GNG4P50150 75 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 TCTAP57738 103 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 ZNF674Q2M3X9 581 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 CENPWQ5EE01 88 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 TOR2AQ5JU69 321 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
TREX1-201ENST00000433541 TMSB15BA0A087X1C1 80 aa10.98□□□□□ -0.65
TREX1-201ENST00000433541 SPINK4O60575 86 aa10.98□□□□□ -0.65
TREX1-201ENST00000433541 IGHV3-53P01767 116 aa10.98□□□□□ -0.65
TREX1-201ENST00000433541 ASIPP42127 132 aa10.98□□□□□ -0.65
TREX1-201ENST00000433541 LGALS9BQ3B8N2 356 aa10.98□□□□□ -0.65
TREX1-201ENST00000433541 RAB19A4D1S5 217 aa10.97□□□□□ -0.65
TREX1-201ENST00000433541 C9JCJ5 164 aa10.97□□□□□ -0.65
TREX1-201ENST00000433541 TMEM88Q6PEY1 159 aa10.97□□□□□ -0.65
TREX1-201ENST00000433541 NACAE9PAV3 2078 aa10.97□□□□□ -0.65
TREX1-201ENST00000433541 LCE6AA0A183 80 aa10.96□□□□□ -0.65
TREX1-201ENST00000433541 GRIFINA4D1Z8 144 aa10.96□□□□□ -0.65
TREX1-201ENST00000433541 M0R2P5 195 aa10.96□□□□□ -0.65
TREX1-201ENST00000433541 LINC00612Q8N6U2 182 aa10.96□□□□□ -0.65
TREX1-201ENST00000433541 LYPD6BQ8NI32 183 aa10.96□□□□□ -0.65
TREX1-201ENST00000433541 DAZAP1Q96EP5 407 aaKnown RBP10.96□□□□□ -0.65
TREX1-201ENST00000433541 FAM210BQ96KR6 192 aa10.96□□□□□ -0.65
TREX1-201ENST00000433541 MUC4Q99102 2169 aa10.96□□□□□ -0.66
TREX1-201ENST00000433541 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 A0A0J9YY99 117 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 NUDT3O95989 172 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 CRIP1P50238 77 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 ZNF506Q5JVG8 444 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 COX8CQ7Z4L0 72 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
TREX1-201ENST00000433541 TRGV4A0A0C4DH28 118 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 KRBOX1C9JBD0 128 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 H3BVH4 76 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 RAB14P61106 215 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 ZNF876PQ49A33 203 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 UBE2DNLQ8IWF7 75 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 C15orf53Q8NAA6 179 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 LINC00476Q8WZB0 136 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 FAM210AQ96ND0 272 aa10.94□□□□□ -0.66
TREX1-201ENST00000433541 TRAV26-1A0A087WT03 109 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 PGPEP1LA6NFU8 196 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 TMEM250H0YL14 139 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 SFTA3P0C7M3 94 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 OR4C5Q8NGB2 326 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 PARLQ9H300 379 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 BIN3Q9NQY0 253 aa10.93□□□□□ -0.66
TREX1-201ENST00000433541 HOXA5P20719 270 aa10.92□□□□□ -0.66
TREX1-201ENST00000433541 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
TREX1-201ENST00000433541 SYT8Q8NBV8 401 aa10.92□□□□□ -0.66
TREX1-201ENST00000433541 RASL10AQ92737 203 aa10.92□□□□□ -0.66
TREX1-201ENST00000433541 SMIM12Q96EX1 92 aa10.92□□□□□ -0.66
TREX1-201ENST00000433541 ARMS2P0C7Q2 107 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 P0DMU3 169 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 FAM231AP0DMU4 169 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 FAM231CP0DMU5 169 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 RNASE3P12724 160 aaKnown RBP10.91□□□□□ -0.66
TREX1-201ENST00000433541 RPL19P84098 196 aaKnown RBP10.91□□□□□ -0.66
TREX1-201ENST00000433541 C9orf85Q96MD7 179 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 C18orf15Q96N68 181 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 IL36BQ9NZH7 164 aa10.91□□□□□ -0.66
TREX1-201ENST00000433541 PHLDA3Q9Y5J5 127 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms