RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 A0A1W2PRM7 423 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 M0R381 172 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 ZNF575Q86XF7 245 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 NRACQ8N912 160 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 SIGMAR1Q99720 223 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 TMEM160Q9NX00 188 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 S4R3C0 116 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 CELSR2Q9HCU4 2923 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 A0A1B0GWB2 263 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 OR11H12B2RN74 326 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 LYNX1G3V0Z9 82 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 NDUFS8O00217 210 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 LYNX1P0DP58 116 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 NDPQ00604 133 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 CD300EQ496F6 205 aaPredicted RBP11.36□□□□□ -0.59
DDX56-205ENST00000433257 SPANXN1Q5VSR9 72 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 C9orf139Q6ZV77 190 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 OR11H2Q8NH07 326 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 SMIM2Q9BVW6 85 aa11.36□□□□□ -0.59
DDX56-205ENST00000433257 MRPL35Q9NZE8 188 aaKnown RBP11.36□□□□□ -0.59
DDX56-205ENST00000433257 TRAV40A0A0B4J280 105 aa11.35□□□□□ -0.59
DDX56-205ENST00000433257 CLEC3BP05452 202 aa11.35□□□□□ -0.59
DDX56-205ENST00000433257 C12orf74Q32Q52 190 aa11.35□□□□□ -0.59
DDX56-205ENST00000433257 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
DDX56-205ENST00000433257 WFDC3Q8IUB2 231 aa11.35□□□□□ -0.59
DDX56-205ENST00000433257 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
DDX56-205ENST00000433257 ASH1LQ9NR48 2969 aaKnown RBP11.35□□□□□ -0.59
DDX56-205ENST00000433257 CENPEQ02224 2701 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 CENPVL3A0A0U1RRI6 287 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 ERCC8Q13216 396 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 C15orf32Q32M92 178 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 Q8N9W7 124 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 LINC00477Q96M19 166 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 NAA38Q9BRA0 125 aaKnown RBP11.34□□□□□ -0.59
DDX56-205ENST00000433257 AGPAT4-IT1Q9H0P7 198 aa11.34□□□□□ -0.59
DDX56-205ENST00000433257 FLNBO75369 2602 aaKnown RBP11.34□□□□□ -0.59
DDX56-205ENST00000433257 DCHS2Q6V1P9 2916 aa11.33□□□□□ -0.59
DDX56-205ENST00000433257 TRBV7-9A0A0J9YWB2 115 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
DDX56-205ENST00000433257 RRN3P1Q2M238 152 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 ATP6V0E2Q8NHE4 81 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 TOMM6Q96B49 74 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 VCX2Q9H322 139 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 TEX48A0A1B0GUV7 120 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 SPATA25Q9BR10 227 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 UFC1Q9Y3C8 167 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 U3KQE9 123 aa11.33□□□□□ -0.6
DDX56-205ENST00000433257 TRBV7-3A0A075B6L6 115 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 OVOL1O14753 267 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 IGHV3-23P01764 117 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 HLA-DMBP28068 263 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 TCTAP57738 103 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 KLRD1Q13241 179 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 GAGE13Q4V321 117 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 TM4SF20Q53R12 229 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 UBTD1Q9HAC8 227 aa11.32□□□□□ -0.6
DDX56-205ENST00000433257 SPANXB1Q9NS25 103 aaPredicted RBP11.32□□□□□ -0.6
DDX56-205ENST00000433257 TRAV21A0A0B4J279 112 aa11.31□□□□□ -0.6
DDX56-205ENST00000433257 RPL32P62910 135 aaKnown RBP11.31□□□□□ -0.6
DDX56-205ENST00000433257 ABCA4P78363 2273 aa11.31□□□□□ -0.6
DDX56-205ENST00000433257 IGHV1-69DA0A0B4J2H0 117 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 A0A1B0GV72 72 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 A0A1W2PPR1 153 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 FAM223BA6NKX1 122 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 UBE2E1P51965 193 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 KRTAP10-9P60411 292 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 FAM223AQ8IWN6 122 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 SCGB3A1Q96QR1 104 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 GAGE12HA6NDE8 117 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 HOXA3O43365 443 aaPredicted RBP11.3□□□□□ -0.6
DDX56-205ENST00000433257 HERVK_113P61574 105 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 SUMO2P61956 95 aaKnown RBP11.3□□□□□ -0.6
DDX56-205ENST00000433257 IGFL4Q6B9Z1 124 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 MTURNQ8N3F0 131 aa11.3□□□□□ -0.6
DDX56-205ENST00000433257 TRAV8-2A0A0B4J237 113 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 TRGV3P03979 118 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 GATA1P15976 413 aaPredicted RBP11.29□□□□□ -0.6
DDX56-205ENST00000433257 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 C11orf71Q6IPW1 123 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 LCNL1Q6ZST4 164 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 SIRPDQ9H106 197 aa11.29□□□□□ -0.6
DDX56-205ENST00000433257 UNC79Q9P2D8 2635 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 K7ERJ3 54 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 ASIPP42127 132 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 ATP5G2Q06055 141 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 ECSCRQ19T08 205 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 OR10J6PQ8NGY7 276 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 C16orf92Q96LL3 132 aa11.28□□□□□ -0.6
DDX56-205ENST00000433257 PPIFP30405 207 aaKnown RBP11.27□□□□□ -0.6
DDX56-205ENST00000433257 RNF182Q8N6D2 247 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms