RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 SSNA1O43805 119 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 TYMSP04818 313 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 GCSHP23434 173 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 GNG5P63218 68 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 FAM74A1Q5RGS3 127 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 S100ZQ8WXG8 99 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 SDF2L1Q9HCN8 221 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 MBD2Q9UBB5 411 aa9.38□□□□□ -0.91
SEC13-211ENST00000431352 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 HMGB3O15347 200 aaKnown RBP9.37□□□□□ -0.91
SEC13-211ENST00000431352 UPK1BO75841 260 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 RAB2AP61019 212 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 TDRG1Q3Y452 100 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 C10orf126Q8N4M7 172 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 TMED6Q8WW62 240 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 SGK494Q96LW2 274 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 Q9HAA7 133 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 TREM1Q9NP99 234 aa9.37□□□□□ -0.91
SEC13-211ENST00000431352 IGLV5-52A0A0A0MRZ9 124 aa9.36□□□□□ -0.91
SEC13-211ENST00000431352 K7EP13 123 aa9.36□□□□□ -0.91
SEC13-211ENST00000431352 MPC2O95563 127 aa9.36□□□□□ -0.91
SEC13-211ENST00000431352 PET100P0DJ07 73 aa9.36□□□□□ -0.91
SEC13-211ENST00000431352 GATA1P15976 413 aaPredicted RBP9.36□□□□□ -0.91
SEC13-211ENST00000431352 RPL12P30050 165 aaKnown RBP9.36□□□□□ -0.91
SEC13-211ENST00000431352 ASB13Q8WXK3 278 aa9.36□□□□□ -0.91
SEC13-211ENST00000431352 TVP23CQ96ET8 276 aa9.36□□□□□ -0.91
SEC13-211ENST00000431352 IGHV3-73A0A0B4J1V6 119 aa9.35□□□□□ -0.91
SEC13-211ENST00000431352 IGHV3-38A0A0C4DH36 116 aa9.35□□□□□ -0.91
SEC13-211ENST00000431352 A0A1W2PPV4 95 aa9.35□□□□□ -0.91
SEC13-211ENST00000431352 FBLL1A6NHQ2 334 aaKnown RBP9.35□□□□□ -0.91
SEC13-211ENST00000431352 IFITM3Q01628 133 aa9.35□□□□□ -0.91
SEC13-211ENST00000431352 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
SEC13-211ENST00000431352 OR10J3Q5JRS4 329 aa9.35□□□□□ -0.91
SEC13-211ENST00000431352 WFDC1Q9HC57 220 aa9.35□□□□□ -0.91
SEC13-211ENST00000431352 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 SH2D6Q7Z4S9 175 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 NDFIP1Q9BT67 221 aa9.34□□□□□ -0.91
SEC13-211ENST00000431352 FAT1Q14517 4588 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 ARL14EPLP0DKL9 152 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 ZNF876PQ49A33 203 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 LINC01556Q5JQF7 62 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 LINC00299Q6ZSB3 139 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
SEC13-211ENST00000431352 FLG2Q5D862 2391 aaPredicted RBP9.32□□□□□ -0.92
SEC13-211ENST00000431352 CFAP126Q5VTH2 177 aa9.32□□□□□ -0.92
SEC13-211ENST00000431352 DPPA3Q6W0C5 159 aa9.32□□□□□ -0.92
SEC13-211ENST00000431352 TMEM75Q8N9X5 138 aa9.32□□□□□ -0.92
SEC13-211ENST00000431352 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
SEC13-211ENST00000431352 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
SEC13-211ENST00000431352 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
SEC13-211ENST00000431352 ZNF80P51504 273 aaPredicted RBP9.31□□□□□ -0.92
SEC13-211ENST00000431352 TIRAPP58753 221 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 RHOHQ15669 191 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 Q6ZSN1 163 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 Q8N814 137 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 MARVELD1Q9BSK0 173 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 C11orf21Q9P2W6 132 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 HERC1Q15751 4861 aa9.31□□□□□ -0.92
SEC13-211ENST00000431352 IBA57-AS1B1ANH7 110 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 RS1O15537 224 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 GCGP01275 180 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 Q8N3U1 123 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 NTN5Q8WTR8 489 aaPredicted RBP9.3□□□□□ -0.92
SEC13-211ENST00000431352 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
SEC13-211ENST00000431352 TCRAP04437 139 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 ZFP69Q49AA0 526 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 ZNF506Q5JVG8 444 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 LELP1Q5T871 98 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 PRNTQ86SH4 94 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 C5orf17Q8NAS9 161 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 C9orf85Q96MD7 179 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 PSG8Q9UQ74 426 aa9.29□□□□□ -0.92
SEC13-211ENST00000431352 SRRM2Q9UQ35 2752 aaKnown RBP9.29□□□□□ -0.92
SEC13-211ENST00000431352 TRBV6-4A0A1B0GX49 114 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 PGPEP1LA6NFU8 196 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 K7EQM0 130 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 TAAR5O14804 337 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 GCHFRP30047 84 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 DEFA1P59665 94 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 DEFA3P59666 94 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 ATP6V0E2Q8NHE4 81 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
SEC13-211ENST00000431352 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.93
SEC13-211ENST00000431352 LECT2O14960 151 aa9.27□□□□□ -0.93
SEC13-211ENST00000431352 STAG3L2P0CL84 134 aa9.27□□□□□ -0.93
SEC13-211ENST00000431352 STAG3L3P0CL85 134 aa9.27□□□□□ -0.93
SEC13-211ENST00000431352 FLI1Q01543 452 aaPredicted RBP9.27□□□□□ -0.93
SEC13-211ENST00000431352 RAB24Q969Q5 203 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms