RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LGALS1P09382 135 aaKnown RBP10.5□□□□□ -0.73
HOXC4-202ENST00000430889 SAMD13Q5VXD3 122 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 Q8N2B8 174 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 ST20Q9HBF5 79 aa10.5□□□□□ -0.73
HOXC4-202ENST00000430889 ZMAT5Q9UDW3 170 aaKnown RBP10.5□□□□□ -0.73
HOXC4-202ENST00000430889 IGLV2-18A0A075B6J9 118 aa10.49□□□□□ -0.73
HOXC4-202ENST00000430889 KLLNB2CW77 178 aa10.49□□□□□ -0.73
HOXC4-202ENST00000430889 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
HOXC4-202ENST00000430889 MED14OSP0DP75 135 aa10.49□□□□□ -0.73
HOXC4-202ENST00000430889 SCRT2Q9NQ03 307 aa10.49□□□□□ -0.73
HOXC4-202ENST00000430889 LGALS9O00182 355 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 HOXA3O43365 443 aaPredicted RBP10.48□□□□□ -0.73
HOXC4-202ENST00000430889 HBDP02042 147 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 EVI2AP22794 236 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 TSPOP30536 169 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 NRACQ8N912 160 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 Q96MF0 132 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 MAP1LC3AQ9H492 121 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 MXRA5Q9NR99 2828 aa10.48□□□□□ -0.73
HOXC4-202ENST00000430889 MRPS16Q9Y3D3 137 aaKnown RBP10.48□□□□□ -0.73
HOXC4-202ENST00000430889 hDV102S1A0JD36 115 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 H3BVH4 76 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 GATA1P15976 413 aaPredicted RBP10.47□□□□□ -0.73
HOXC4-202ENST00000430889 RPL11P62913 178 aaKnown RBP10.47□□□□□ -0.73
HOXC4-202ENST00000430889 KIR3DS1Q14943 382 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 Q6ZN92 141 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 MCRIP2Q9BUT9 160 aaKnown RBP10.47□□□□□ -0.73
HOXC4-202ENST00000430889 CENPEQ02224 2701 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 SRD5A1P18405 259 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
HOXC4-202ENST00000430889 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 UBE2E2Q96LR5 201 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 NXT2Q9NPJ8 142 aaKnown RBP10.47□□□□□ -0.73
HOXC4-202ENST00000430889 SELENOKQ9Y6D0 94 aa10.47□□□□□ -0.73
HOXC4-202ENST00000430889 IGKV3-7A0A075B6H7 116 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 IGHV4OR15-8A0A075B7B6 117 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 A0A087WW49 117 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 NXPH4O95158 308 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 ID1P41134 155 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 LGALS9BQ3B8N2 356 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 LGALS9CQ6DKI2 356 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 OR2K2Q8NGT1 345 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 ODF3Q96PU9 254 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 KRTAP3-3Q9BYR6 98 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 KRTAP3-2Q9BYR7 98 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 APCP25054 2843 aa10.46□□□□□ -0.74
HOXC4-202ENST00000430889 J3QKU1 62 aa10.45□□□□□ -0.74
HOXC4-202ENST00000430889 K7EQG2 157 aa10.45□□□□□ -0.74
HOXC4-202ENST00000430889 PLA2G2AP14555 144 aa10.45□□□□□ -0.74
HOXC4-202ENST00000430889 Q8N8P6 123 aa10.45□□□□□ -0.74
HOXC4-202ENST00000430889 FASNP49327 2511 aaKnown RBP10.45□□□□□ -0.74
HOXC4-202ENST00000430889 J3KRW8 73 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 RNASE3P12724 160 aaKnown RBP10.44□□□□□ -0.74
HOXC4-202ENST00000430889 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
HOXC4-202ENST00000430889 ASIPP42127 132 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 FXYD7P58549 80 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 SPANXN1Q5VSR9 72 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 MUC4Q99102 2169 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 FCER1GP30273 86 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 SMIM15Q7Z3B0 74 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 MRAP2Q96G30 205 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 PMCHL2Q9BQD1 86 aa10.44□□□□□ -0.74
HOXC4-202ENST00000430889 TIMM8BQ9Y5J9 83 aaPredicted RBP10.44□□□□□ -0.74
HOXC4-202ENST00000430889 ZNF469Q96JG9 3925 aaPredicted RBP10.43□□□□□ -0.74
HOXC4-202ENST00000430889 NAV2Q8IVL1 2488 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 TEX15Q9BXT5 2789 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 ABCA12Q86UK0 2595 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 DOPEY2Q9Y3R5 2298 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
HOXC4-202ENST00000430889 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 ADAMTSL5Q6ZMM2 481 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 POM121L12Q8N7R1 296 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 DPF1Q92782 380 aa10.43□□□□□ -0.74
HOXC4-202ENST00000430889 A0A0J9YX75 114 aa10.42□□□□□ -0.74
HOXC4-202ENST00000430889 H0Y8G0 127 aa10.42□□□□□ -0.74
HOXC4-202ENST00000430889 GNRH2O43555 120 aa10.42□□□□□ -0.74
HOXC4-202ENST00000430889 TP73-AS1Q9UF72 201 aa10.42□□□□□ -0.74
HOXC4-202ENST00000430889 NBPF19A0A087WUL8 3843 aa10.42□□□□□ -0.74
HOXC4-202ENST00000430889 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 WFDC3Q8IUB2 231 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 STPG4Q8N801 248 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 AKAP9Q99996 3911 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 CREBBPQ92793 2442 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 HSBP1L1C9JCN9 74 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 SPRY2O43597 315 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 ZNF688P0C7X2 276 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 LEPP41159 167 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 COL5A1-AS1Q5SY13 56 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 TMEM86BQ8N661 226 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 GOLT1BQ9Y3E0 138 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 KIF25-AS1Q9Y6Z4 181 aa10.41□□□□□ -0.74
HOXC4-202ENST00000430889 TCAPO15273 167 aa10.4□□□□□ -0.74
HOXC4-202ENST00000430889 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
HOXC4-202ENST00000430889 C18orf65Q6ZTR6 163 aa10.4□□□□□ -0.74
HOXC4-202ENST00000430889 RASL10AQ92737 203 aa10.4□□□□□ -0.74
HOXC4-202ENST00000430889 ZMAT4Q9H898 229 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms