RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 IGHV1OR15-1A0A075B7D0 117 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 S100A9P06702 114 aaKnown RBP11.97□□□□□ -0.49
UBE3D-204ENST00000430071 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 ZC2HC1AQ96GY0 325 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 NDUFAF3Q9BU61 184 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 C11orf21Q9P2W6 132 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 DNAH17Q9UFH2 4485 aa11.97□□□□□ -0.49
UBE3D-204ENST00000430071 HECTD4Q9Y4D8 3996 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 TRAV21A0A0B4J279 112 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 RGS13O14921 159 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 CRIP1P50238 77 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 EIF4E3Q8N5X7 224 aaKnown RBP11.96□□□□□ -0.49
UBE3D-204ENST00000430071 NHLRC2Q8NBF2 726 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.49
UBE3D-204ENST00000430071 EIF5A2Q9GZV4 153 aaKnown RBP11.96□□□□□ -0.49
UBE3D-204ENST00000430071 MED9Q9NWA0 146 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 TP53TG3Q9ULZ0 132 aa11.96□□□□□ -0.49
UBE3D-204ENST00000430071 MUC4Q99102 2169 aa11.96□□□□□ -0.5
UBE3D-204ENST00000430071 RAB19A4D1S5 217 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 ANXA2RQ3ZCQ2 193 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 ZNF493Q6ZR52 646 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 BAGE2Q86Y30 109 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 TMEM183AQ8IXX5 376 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 C16orf74Q96GX8 76 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 MLST8Q9BVC4 326 aa11.95□□□□□ -0.5
UBE3D-204ENST00000430071 TRBV20OR9-2A0A075B6H5 130 aa11.94□□□□□ -0.5
UBE3D-204ENST00000430071 CBY3A6NI87 242 aa11.94□□□□□ -0.5
UBE3D-204ENST00000430071 PFN1P07737 140 aaKnown RBP11.94□□□□□ -0.5
UBE3D-204ENST00000430071 DAD1P61803 113 aa11.94□□□□□ -0.5
UBE3D-204ENST00000430071 NAGKQ9UJ70 344 aa11.94□□□□□ -0.5
UBE3D-204ENST00000430071 DNAH2Q9P225 4427 aa11.94□□□□□ -0.5
UBE3D-204ENST00000430071 TMEM250H0YL14 139 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 M0R2N4 97 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 IGLV2-8P01709 118 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 TDRG1Q3Y452 100 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 CENPWQ5EE01 88 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 FAM159AQ6UWV7 190 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 POM121L12Q8N7R1 296 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 C11orf72Q8NBR9 251 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 FAT2Q9NYQ8 4349 aa11.93□□□□□ -0.5
UBE3D-204ENST00000430071 SH2D1AO60880 128 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 DEFB130BP0DP73 79 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 DEFB130AP0DP74 79 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 RAB14P61106 215 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 SRSF3P84103 164 aaKnown RBP11.92□□□□□ -0.5
UBE3D-204ENST00000430071 CLLU1Q5K131 121 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 TMEM88Q6PEY1 159 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 GSN-AS1Q9NRJ2 163 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 TEX48A0A1B0GUV7 120 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 FABP5P3A8MUU1 101 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 C9JQL5 133 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 GNRH2O43555 120 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 SRP19P09132 144 aaKnown RBP11.92□□□□□ -0.5
UBE3D-204ENST00000430071 ZNF674Q2M3X9 581 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 PARLQ9H300 379 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 NOP10Q9NPE3 64 aaKnown RBP11.92□□□□□ -0.5
UBE3D-204ENST00000430071 MDFICQ9P1T7 246 aa11.92□□□□□ -0.5
UBE3D-204ENST00000430071 TIMM8BQ9Y5J9 83 aaPredicted RBP11.92□□□□□ -0.5
UBE3D-204ENST00000430071 PGPEP1LA6NFU8 196 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 NDUFS6O75380 124 aaKnown RBP11.91□□□□□ -0.5
UBE3D-204ENST00000430071 P0DMU3 169 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 FAM231AP0DMU4 169 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 FAM231CP0DMU5 169 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 GNG4P50150 75 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 CEBPGP53567 150 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 IBA57Q5T440 356 aaKnown RBP11.91□□□□□ -0.5
UBE3D-204ENST00000430071 FAM162BQ5T6X4 162 aa11.91□□□□□ -0.5
UBE3D-204ENST00000430071 IGKV3D-20A0A0C4DH25 116 aa11.9□□□□□ -0.5
UBE3D-204ENST00000430071 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
UBE3D-204ENST00000430071 TYMSP04818 313 aa11.9□□□□□ -0.5
UBE3D-204ENST00000430071 TCL1AP56279 114 aa11.9□□□□□ -0.5
UBE3D-204ENST00000430071 KCNS1Q96KK3 526 aa11.9□□□□□ -0.5
UBE3D-204ENST00000430071 SDF2L1Q9HCN8 221 aa11.9□□□□□ -0.5
UBE3D-204ENST00000430071 IGLV2-18A0A075B6J9 118 aa11.89□□□□□ -0.51
UBE3D-204ENST00000430071 TRGV11A0A075B6L2 103 aa11.89□□□□□ -0.51
UBE3D-204ENST00000430071 IGHV3-16A0A0C4DH30 117 aa11.89□□□□□ -0.51
UBE3D-204ENST00000430071 SNURFLB1AK76 121 aa11.89□□□□□ -0.51
UBE3D-204ENST00000430071 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
UBE3D-204ENST00000430071 PRR27Q6MZM9 219 aa11.89□□□□□ -0.51
UBE3D-204ENST00000430071 C9JCJ5 164 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 M0R036 132 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 ORM1P02763 201 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 ZNF415Q09FC8 603 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 ZNF575Q86XF7 245 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 FAM210BQ96KR6 192 aa11.88□□□□□ -0.51
UBE3D-204ENST00000430071 PKHD1P08F94 4074 aa11.87□□□□□ -0.51
UBE3D-204ENST00000430071 KRBOX1C9JBD0 128 aa11.87□□□□□ -0.51
UBE3D-204ENST00000430071 RTL8CO15255 209 aa11.87□□□□□ -0.51
UBE3D-204ENST00000430071 MGST1P10620 155 aaKnown RBP11.87□□□□□ -0.51
UBE3D-204ENST00000430071 PEA15Q15121 130 aa11.87□□□□□ -0.51
UBE3D-204ENST00000430071 B4DEV8 164 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 F5H768 121 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 LINC01559Q495D7 138 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 Q6ZTI0 123 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 UBE2DNLQ8IWF7 75 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 LINC00612Q8N6U2 182 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 OCC1Q8TAD7 63 aa11.86□□□□□ -0.51
UBE3D-204ENST00000430071 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms