RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 C5orf47Q569G3 176 aa10.19□□□□□ -0.78
SNRNP200-202ENST00000429650 IGLV2-18A0A075B6J9 118 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 UQCRFS1P47985 274 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 C19orf54Q5BKX5 351 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 ADAMTSL5Q6ZMM2 481 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 Q6ZQT7 251 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 Q8N8P6 123 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 HSD52Q0P140 79 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 OR2K2Q8NGT1 345 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 ZMAT4Q9H898 229 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 LINC00527Q9UJ94 153 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 MOB4Q9Y3A3 225 aa10.18□□□□□ -0.78
SNRNP200-202ENST00000429650 TRAV41A0A0B4J266 112 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 PIFOQ8TCI5 191 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 TMEM158Q8WZ71 300 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 TSSC4Q9Y5U2 329 aaPredicted RBP10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 IGHV3OR16-10A0A075B7F0 116 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 OR4X2Q8NGF9 303 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 C16orf92Q96LL3 132 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 CST9LQ9H4G1 147 aa10.17□□□□□ -0.78
SNRNP200-202ENST00000429650 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 NRACQ8N912 160 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 A6NDN8 102 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 TSPAN13O95857 204 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 PRSS1P07477 247 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 PRR9Q5T870 116 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 ABCA2Q9BZC7 2435 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 HHLA3Q9XRX5 114 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
SNRNP200-202ENST00000429650 PKD1L2Q7Z442 2459 aa10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 IGHV4-4A0A075B6R2 117 aa10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 TRAV26-2A0A0B4J265 109 aa10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 H3BRM9 83 aa10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 RNF152Q8N8N0 203 aa10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 ITLN2Q8WWU7 325 aaPredicted RBP10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 C20orf173Q96LM9 149 aa10.15□□□□□ -0.78
SNRNP200-202ENST00000429650 C19orf84I3L1E1 186 aa10.15□□□□□ -0.79
SNRNP200-202ENST00000429650 CKS1BP61024 79 aa10.15□□□□□ -0.79
SNRNP200-202ENST00000429650 C9orf139Q6ZV77 190 aa10.15□□□□□ -0.79
SNRNP200-202ENST00000429650 FOXC2Q99958 501 aa10.15□□□□□ -0.79
SNRNP200-202ENST00000429650 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 KIR3DS1Q14943 382 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 IGHV1-69DA0A0B4J2H0 117 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 C9orf118A6NHY6 69 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 H3BVH4 76 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 IGHV1-69P01742 117 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 IGHV4-39P01824 125 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 IGKCP01834 107 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 SMIM17P0DL12 118 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 LENEPQ9Y5L5 61 aa10.14□□□□□ -0.79
SNRNP200-202ENST00000429650 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.14□□□□□ -0.797e-7■■■□□ 18.9
SNRNP200-202ENST00000429650 ZANQ9Y493 2812 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 ATP5LO75964 103 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 TRBV12-3P01733 135 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 IGF1P05019 195 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 UNQ9165/PRO28630Q6UXU0 137 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 BRD3OSQ6XYD6 125 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 GPHB5Q86YW7 130 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 ZFYVE26Q68DK2 2539 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 POLQO75417 2590 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 LAGE3Q14657 143 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 JMJD8Q96S16 334 aa10.13□□□□□ -0.79
SNRNP200-202ENST00000429650 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 SS18L2Q9UHA2 77 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 GAGE12BA1L429 117 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 GAGE10A6NGK3 116 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 OR11H12B2RN74 326 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 DPM2O94777 84 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 OR11H1Q8NG94 326 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 AP1S3Q96PC3 154 aa10.12□□□□□ -0.79
SNRNP200-202ENST00000429650 TMEM8BA6NDV4 472 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 H3BUT2 72 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 NDUFA4O00483 81 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 UFSP1Q6NVU6 142 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 ZFAND2AQ8N6M9 145 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 MEGF9Q9H1U4 602 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 SELENOKQ9Y6D0 94 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 SOCS3O14543 225 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 GTSCR1Q86UQ5 136 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 MYOZ3Q8TDC0 251 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 LINC00477Q96M19 166 aa10.11□□□□□ -0.79
SNRNP200-202ENST00000429650 CACNA1AO00555 2505 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 ZC2HC1BQ5TFG8 222 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 MRAP2Q96G30 205 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 NAA38Q9BRA0 125 aaKnown RBP10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 HIGD1BQ9P298 99 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 CSPG4Q6UVK1 2322 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 A0A0G2JLM5 398 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 PIEZO1Q92508 2521 aa10.1□□□□□ -0.79
SNRNP200-202ENST00000429650 USP9XQ93008 2570 aaPredicted RBP10.09□□□□□ -0.79
SNRNP200-202ENST00000429650 IGHV4-61A0A0C4DH41 118 aa10.09□□□□□ -0.79
SNRNP200-202ENST00000429650 DEFB1P60022 68 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms