RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 C2orf83Q53S99 150 aa8.87□□□□□ -0.99
CECR3-201ENST00000428828 CFAP126Q5VTH2 177 aa8.87□□□□□ -0.99
CECR3-201ENST00000428828 Q6YL49 198 aa8.87□□□□□ -0.99
CECR3-201ENST00000428828 IFI27L1Q96BM0 104 aa8.87□□□□□ -0.99
CECR3-201ENST00000428828 NHP2Q9NX24 153 aaKnown RBP8.87□□□□□ -0.99
CECR3-201ENST00000428828 IGKV1OR2-108A0A075B7D4 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 NCBP2LA6PVI3 153 aaKnown RBP8.86□□□□□ -0.99
CECR3-201ENST00000428828 EVI2AP22794 236 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 C12orf74Q32Q52 190 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 TMEM116Q8NCL8 245 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 OR8A1Q8NGG7 326 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 PPDPFLQ8WWR9 84 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 FXYD5Q96DB9 178 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 GAGE12JA6NER3 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 NPIPB5A8MRT5 1133 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 GAGE7O76087 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 GAGE12FP0CL80 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 GAGE12GP0CL81 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 GAGE12IP0CL82 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 GAGE4Q13068 117 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 PLGLAQ15195 96 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 Q6Q795 121 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 OR1L8Q8NGR8 309 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 OSR1Q8TAX0 266 aaPredicted RBP8.86□□□□□ -0.99
CECR3-201ENST00000428828 CITED1Q99966 193 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 PRNDQ9UKY0 176 aa8.86□□□□□ -0.99
CECR3-201ENST00000428828 TNCP24821 2201 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 TRBV25-1A0A075B6N4 114 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 B5MCH6 92 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 K7ERJ3 54 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 CRLF1O75462 422 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 SAA1P0DJI8 122 aaPredicted RBP8.85□□□□□ -0.99
CECR3-201ENST00000428828 ARL3P36405 182 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 ZNF562Q6V9R5 426 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 PRELID3AQ96N28 172 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 FBXL15Q9H469 300 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 UFC1Q9Y3C8 167 aa8.85□□□□□ -0.99
CECR3-201ENST00000428828 NIPBLQ6KC79 2804 aaeCLIP8.85□□□□□ -0.99
CECR3-201ENST00000428828 LINC01546A6NGU7 62 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 DNAJC9-AS1A6NH13 148 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 RHODO00212 210 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 NBR2O15453 112 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 IGLV2-23P01705 113 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 CSN3P07498 182 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 PRCDQ00LT1 54 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 EBI3Q14213 229 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 LINC00322Q6ZN03 302 aaPredicted RBP8.84□□□□□ -0.99
CECR3-201ENST00000428828 TMEM158Q8WZ71 300 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 HHLA3Q9XRX5 114 aa8.84□□□□□ -0.99
CECR3-201ENST00000428828 TRAV3A0A0B4J244 114 aa8.84□□□□□ -1
CECR3-201ENST00000428828 A6NDX4 124 aa8.84□□□□□ -1
CECR3-201ENST00000428828 INS-IGF2F8WCM5 200 aa8.84□□□□□ -1
CECR3-201ENST00000428828 BRI3O95415 125 aa8.84□□□□□ -1
CECR3-201ENST00000428828 NHLRC4P0CG21 123 aaPredicted RBP8.84□□□□□ -1
CECR3-201ENST00000428828 CD69Q07108 199 aa8.84□□□□□ -1
CECR3-201ENST00000428828 VMA21Q3ZAQ7 101 aa8.84□□□□□ -1
CECR3-201ENST00000428828 Q8N6K4 173 aa8.84□□□□□ -1
CECR3-201ENST00000428828 VPREB3Q9UKI3 123 aa8.84□□□□□ -1
CECR3-201ENST00000428828 F11RQ9Y624 299 aaKnown RBP8.84□□□□□ -1
CECR3-201ENST00000428828 NF1P21359 2839 aa8.83□□□□□ -1
CECR3-201ENST00000428828 M0QXV9 152 aa8.83□□□□□ -1
CECR3-201ENST00000428828 SBSPONQ8IVN8 264 aa8.83□□□□□ -1
CECR3-201ENST00000428828 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
CECR3-201ENST00000428828 ESM1Q9NQ30 184 aa8.83□□□□□ -1
CECR3-201ENST00000428828 MOB4Q9Y3A3 225 aa8.83□□□□□ -1
CECR3-201ENST00000428828 WI2-2373I1.2A0A1W2PRP0 233 aa8.82□□□□□ -1
CECR3-201ENST00000428828 COX7A2P2O60397 106 aa8.82□□□□□ -1
CECR3-201ENST00000428828 SLC25A5P05141 298 aaKnown RBP8.82□□□□□ -1
CECR3-201ENST00000428828 IFI27P40305 119 aaPredicted RBP8.82□□□□□ -1
CECR3-201ENST00000428828 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
CECR3-201ENST00000428828 C10orf113Q5VZT2 155 aa8.82□□□□□ -1
CECR3-201ENST00000428828 TEN1Q86WV5 123 aa8.82□□□□□ -1
CECR3-201ENST00000428828 TRAV5A0A0B4J249 113 aa8.82□□□□□ -1
CECR3-201ENST00000428828 MYOD1P15172 320 aa8.82□□□□□ -1
CECR3-201ENST00000428828 ASIPP42127 132 aa8.82□□□□□ -1
CECR3-201ENST00000428828 SRSF2Q01130 221 aaKnown RBP8.82□□□□□ -1
CECR3-201ENST00000428828 FHL3Q13643 280 aa8.82□□□□□ -1
CECR3-201ENST00000428828 TM4SF20Q53R12 229 aa8.82□□□□□ -1
CECR3-201ENST00000428828 ASPHD1Q5U4P2 390 aa8.82□□□□□ -1
CECR3-201ENST00000428828 MORN5Q5VZ52 161 aa8.82□□□□□ -1
CECR3-201ENST00000428828 NFE4Q86UQ8 179 aa8.82□□□□□ -1
CECR3-201ENST00000428828 NPBQ8NG41 125 aa8.82□□□□□ -1
CECR3-201ENST00000428828 RNF5Q99942 180 aa8.82□□□□□ -1
CECR3-201ENST00000428828 SIGLEC9Q9Y336 463 aa8.82□□□□□ -1
CECR3-201ENST00000428828 A0A087WX48 190 aa8.81□□□□□ -1
CECR3-201ENST00000428828 FABP5P3A8MUU1 101 aa8.81□□□□□ -1
CECR3-201ENST00000428828 NDUFA3O95167 84 aa8.81□□□□□ -1
CECR3-201ENST00000428828 SMCPP49901 116 aaPredicted RBP8.81□□□□□ -1
CECR3-201ENST00000428828 SMIM20Q8N5G0 67 aa8.81□□□□□ -1
CECR3-201ENST00000428828 C5orf56Q8N8D9 126 aa8.81□□□□□ -1
CECR3-201ENST00000428828 Q8N9W7 124 aa8.81□□□□□ -1
CECR3-201ENST00000428828 RASL11BQ9BPW5 248 aa8.81□□□□□ -1
CECR3-201ENST00000428828 SPXQ9BT56 116 aa8.81□□□□□ -1
CECR3-201ENST00000428828 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
CECR3-201ENST00000428828 ATP5LO75964 103 aa8.8□□□□□ -1
CECR3-201ENST00000428828 TCRAP04437 139 aa8.8□□□□□ -1
CECR3-201ENST00000428828 PYYP10082 97 aa8.8□□□□□ -1
CECR3-201ENST00000428828 ODF1Q14990 250 aa8.8□□□□□ -1
CECR3-201ENST00000428828 C10orf55Q5SWW7 151 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms