RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 REC114Q7Z4M0 266 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 TMEM86BQ8N661 226 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 PRSS3P2Q8NHM4 247 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 PRELID3AQ96N28 172 aa7.82□□□□□ -1.16
HDAC9-210ENST00000428307 TRAV21A0A0B4J279 112 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 H3BVH4 76 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 LGALS9O00182 355 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 CD5LO43866 347 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 EBLN2Q6P2I7 272 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 ORMDL3Q8N138 153 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 DPF1Q92782 380 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 CHCHD1Q96BP2 118 aaKnown RBP7.81□□□□□ -1.16
HDAC9-210ENST00000428307 SMR3AQ99954 134 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 TMEM191AQ9H0A3 160 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 GAS8-AS1O95177 125 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 EVI2AP22794 236 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 DDTP30046 118 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
HDAC9-210ENST00000428307 ADAMTSL5Q6ZMM2 481 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 Q8N976 141 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 KLHL30-AS1Q8NEE0 82 aa7.81□□□□□ -1.16
HDAC9-210ENST00000428307 SNRPD3P62318 126 aaKnown RBP7.8□□□□□ -1.16
HDAC9-210ENST00000428307 ANXA2RQ3ZCQ2 193 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 SPANXN1Q5VSR9 72 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 LINC00173Q6ZV60 143 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 FAM19A4Q96LR4 140 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 AP5S1Q9NUS5 200 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 PAM16Q9Y3D7 125 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 WNK1Q9H4A3 2382 aa7.8□□□□□ -1.16
HDAC9-210ENST00000428307 A0A1W2PRX2 142 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 LINC01619G3V211 115 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 K7EQG2 157 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 GNRH2O43555 120 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 RAB4AP20338 218 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 S100A4P26447 101 aaKnown RBP7.79□□□□□ -1.16
HDAC9-210ENST00000428307 ATOH7Q8N100 152 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 OR1N2Q8NGR9 330 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 RNF185Q96GF1 192 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 HIVEP2P31629 2446 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 LEPROTL1O95214 131 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 NPYP01303 97 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 TEX43Q6ZNM6 134 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 FA2HQ7L5A8 372 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 C4orf3Q8WVX3 66 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 DLX4Q92988 240 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-210ENST00000428307 U3KQK5 164 aa7.79□□□□□ -1.16
HDAC9-210ENST00000428307 M0R381 172 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 GATA1P15976 413 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-210ENST00000428307 FXYD7P58549 80 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 SAMD13Q5VXD3 122 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 SIGLEC8Q9NYZ4 499 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 TRAV12-3A0A0B4J271 114 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 OR5AL1P0C617 328 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 BTF3P20290 206 aaKnown RBP7.78□□□□□ -1.16
HDAC9-210ENST00000428307 DEFA6Q01524 100 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 VAMP8Q9BV40 100 aa7.78□□□□□ -1.16
HDAC9-210ENST00000428307 TRAV12-2A0A075B6T6 113 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 A0A0J9YX75 114 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 H0Y8G0 127 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 OR9G4Q8NGQ1 327 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 TRAV26-2A0A0B4J265 109 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 KLLNB2CW77 178 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 SNAI2O43623 268 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 ASIPP42127 132 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 SMIM15Q7Z3B0 74 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 SPATA12Q7Z6I5 190 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 TMEM70Q9BUB7 260 aa7.77□□□□□ -1.17
HDAC9-210ENST00000428307 MCRIP2Q9BUT9 160 aaKnown RBP7.77□□□□□ -1.17
HDAC9-210ENST00000428307 NIPBLQ6KC79 2804 aaeCLIP7.77□□□□□ -1.17
HDAC9-210ENST00000428307 TRBV7-9A0A0J9YWB2 115 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 CD28P10747 220 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 DMRTA1Q5VZB9 504 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 C14orf144Q96I85 54 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 PEMTQ9UBM1 199 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 PHLDA3Q9Y5J5 127 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 AGRNO00468 2067 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 TCF21O43680 179 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 SPINK13Q1W4C9 94 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 MAJINQ3KP22 176 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 FAM159AQ6UWV7 190 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 TMEM61Q8N0U2 210 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 LINC01006Q8NI28 216 aa7.76□□□□□ -1.17
HDAC9-210ENST00000428307 TNFRSF6BO95407 300 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 PPBPP02775 128 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 RAX2Q96IS3 184 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 OTOGQ6ZRI0 2925 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 IGHV4-4A0A075B6R2 117 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 KIR2DL5BA0A0G2JN68 375 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 KIR2DL5BA0A0G2JPC4 375 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 KNCNA6PVL3 124 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 SYS1-DBNDD2H3BUS1 97 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 RNASE3P12724 160 aaKnown RBP7.75□□□□□ -1.17
HDAC9-210ENST00000428307 DEFB131AP59861 70 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 CACNG7P62955 275 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 ZNF124Q15973 351 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 KIR2DL5AQ8N109 375 aa7.75□□□□□ -1.17
HDAC9-210ENST00000428307 CITED2Q99967 270 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-210ENST00000428307 CD7P09564 240 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms